Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 AP005435.3-201ENST00000531260 3198 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC092692.1-201ENST00000623625 2595 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 OR4K15-201ENST00000305051 1216 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 MIR323A-201ENST00000362199 86 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 RNU6-797P-201ENST00000363101 109 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 SNORA72.1-201ENST00000363485 129 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 RNY4P14-201ENST00000363656 96 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 MIR433-201ENST00000384837 93 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXC12P31275 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.49□□□□□ -1.53
HOXC12P31275 AL157702.1-201ENST00000398764 426 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 RNA5SP156-201ENST00000410250 110 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 RNU4-55P-201ENST00000410731 137 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 TPMTP2-201ENST00000414372 726 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 USP9YP36-201ENST00000424581 829 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 ELOCP14-201ENST00000428070 331 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 MTND6P12-201ENST00000428247 522 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 TIMM9P3-201ENST00000428659 274 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 FCF1P1-201ENST00000432690 571 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC094019.1-201ENST00000434678 472 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 ELOCP7-201ENST00000439968 331 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 MTND5P20-201ENST00000448677 143 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 MTND3P10-201ENST00000450967 341 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 HIGD1AP16-201ENST00000450986 258 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 RPL31P50-201ENST00000471002 296 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC007998.1-201ENST00000474156 672 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC098799.2-201ENST00000509466 868 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 PRMT5P1-201ENST00000514351 598 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.49□□□□□ -1.53
HOXC12P31275 RNA5SP271-201ENST00000516700 88 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 RNA5SP206-201ENST00000516703 121 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 ZNF705CP-201ENST00000530515 889 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC073916.1-201ENST00000545095 130 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 LSM6P2-201ENST00000552208 177 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC092332.1-201ENST00000563684 829 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC090312.1-201ENST00000580637 348 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC063977.5-201ENST00000601044 974 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AP001823.1-201ENST00000604056 1003 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AL359999.1-201ENST00000604513 294 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC090948.2-201ENST00000607363 564 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 AL512624.1-201ENST00000613638 469 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC063943.3-201ENST00000615562 356 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC002553.4-201ENST00000616896 331 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 AC022140.2-201ENST00000623500 188 ntBASIC5.49□□□□□ -1.53
HOXC12P31275 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXC12P31275 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HOXC12P31275 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 XPOTP1-201ENST00000443317 2398 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms