Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT3P12035 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.47□□□□□ -1.69
KRT3P12035 UBTFL9-201ENST00000534504 1148 ntBASIC4.47□□□□□ -1.69
KRT3P12035 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT3P12035 CR383656.6-201ENST00000550518 394 ntBASIC4.47□□□□□ -1.69
KRT3P12035 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT3P12035 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT3P12035 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 AC084757.1-201ENST00000559987 490 ntBASIC4.47□□□□□ -1.69
KRT3P12035 MIR5096-201ENST00000583713 70 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT3P12035 AC068790.4-201ENST00000602474 263 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.47□□□□□ -1.69
KRT3P12035 AL031666.3-201ENST00000609320 1006 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AL445363.3-201ENST00000623080 671 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC007342.8-201ENST00000623278 678 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC138907.10-201ENST00000623708 983 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC020978.9-201ENST00000624380 1141 ntBASIC4.47□□□□□ -1.69
KRT3P12035 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT3P12035 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
KRT3P12035 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT3P12035 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KRT3P12035 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
KRT3P12035 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.69
KRT3P12035 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
KRT3P12035 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
KRT3P12035 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KRT3P12035 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
KRT3P12035 RNU1-14P-201ENST00000362759 152 ntBASIC4.46□□□□□ -1.7
KRT3P12035 GCNT6-201ENST00000379591 934 ntBASIC4.46□□□□□ -1.7
KRT3P12035 U3.22-201ENST00000391120 215 ntBASIC4.46□□□□□ -1.7
KRT3P12035 MIR1179-201ENST00000408703 91 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC009480.2-201ENST00000422916 432 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC073069.1-201ENST00000428657 441 ntBASIC4.46□□□□□ -1.7
KRT3P12035 DNAJC19P7-201ENST00000428811 344 ntBASIC4.46□□□□□ -1.7
KRT3P12035 MTCO1P52-201ENST00000433928 531 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC069540.1-201ENST00000446320 988 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC011276.1-201ENST00000469688 323 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC078857.1-201ENST00000469870 667 ntBASIC4.46□□□□□ -1.7
KRT3P12035 RN7SL691P-201ENST00000494487 301 ntBASIC4.46□□□□□ -1.7
KRT3P12035 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT3P12035 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.46□□□□□ -1.7
KRT3P12035 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.46□□□□□ -1.7
KRT3P12035 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.46□□□□□ -1.7
KRT3P12035 RNA5SP49-201ENST00000516450 115 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC113192.3-201ENST00000529152 742 ntBASIC4.46□□□□□ -1.7
KRT3P12035 DEFB109D-201ENST00000529497 240 ntBASIC4.46□□□□□ -1.7
KRT3P12035 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT3P12035 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT3P12035 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT3P12035 AC106785.3-201ENST00000564064 847 ntBASIC4.46□□□□□ -1.7
KRT3P12035 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT3P12035 TMF1P1-201ENST00000576058 373 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC015911.5-201ENST00000587076 451 ntBASIC4.46□□□□□ -1.7
KRT3P12035 ELOCP28-201ENST00000590044 317 ntBASIC4.46□□□□□ -1.7
KRT3P12035 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KRT3P12035 AC008745.1-201ENST00000604064 271 ntBASIC4.46□□□□□ -1.7
KRT3P12035 MIR432-201ENST00000606207 94 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC055764.2-201ENST00000610089 670 ntBASIC4.46□□□□□ -1.7
KRT3P12035 MIR6820-201ENST00000611508 62 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AL121873.1-201ENST00000616013 524 ntBASIC4.46□□□□□ -1.7
KRT3P12035 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRT3P12035 AC097460.3-201ENST00000623099 442 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC067852.7-201ENST00000623270 535 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AC015726.3-201ENST00000624501 418 ntBASIC4.46□□□□□ -1.7
KRT3P12035 AL356121.2-201ENST00000624715 780 ntBASIC4.46□□□□□ -1.7
KRT3P12035 MIR6715B-201ENST00000637172 77 ntBASIC4.46□□□□□ -1.7
KRT3P12035 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.46□□□□□ -1.7
KRT3P12035 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KRT3P12035 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRT3P12035 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
KRT3P12035 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRT3P12035 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
KRT3P12035 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRT3P12035 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRT3P12035 NOL8P1-201ENST00000508336 3529 ntBASIC4.45□□□□□ -1.7
KRT3P12035 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.45□□□□□ -1.7
KRT3P12035 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRT3P12035 RNU6-792P-201ENST00000363490 107 ntBASIC4.45□□□□□ -1.7
KRT3P12035 SNORA62.2-201ENST00000364672 152 ntBASIC4.45□□□□□ -1.7
KRT3P12035 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRT3P12035 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.45□□□□□ -1.7
KRT3P12035 AC011933.1-201ENST00000413334 321 ntBASIC4.45□□□□□ -1.7
KRT3P12035 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT3P12035 MTCO2P1-201ENST00000424648 477 ntBASIC4.45□□□□□ -1.7
KRT3P12035 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT3P12035 AL512661.1-201ENST00000434586 1253 ntBASIC4.45□□□□□ -1.7
KRT3P12035 RPS3AP54-201ENST00000435535 734 ntBASIC4.45□□□□□ -1.7
KRT3P12035 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.45□□□□□ -1.7
KRT3P12035 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.45□□□□□ -1.7
KRT3P12035 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
KRT3P12035 CBX1P1-201ENST00000440184 427 ntBASIC4.45□□□□□ -1.7
KRT3P12035 RPS27P5-201ENST00000444247 244 ntBASIC4.45□□□□□ -1.7
KRT3P12035 EEF1A1P1-201ENST00000447052 739 ntBASIC4.45□□□□□ -1.7
KRT3P12035 CYCSP42-201ENST00000450823 238 ntBASIC4.45□□□□□ -1.7
KRT3P12035 HMGB3P21-201ENST00000452483 547 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms