Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC011330.2-201ENST00000621680 635 ntBASIC4.96□□□□□ -1.62
HOXC6P09630 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HOXC6P09630 AC006927.2-201ENST00000639256 389 ntBASIC4.96□□□□□ -1.62
HOXC6P09630 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HOXC6P09630 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HOXC6P09630 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC6P09630 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC6P09630 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXC6P09630 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC6P09630 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXC6P09630 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC6P09630 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC6P09630 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC6P09630 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC6P09630 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
HOXC6P09630 RNU1-14P-201ENST00000362759 152 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 RNU5B-4P-201ENST00000363508 111 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 RNA5SP513-201ENST00000364648 118 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC6P09630 MIR23A-201ENST00000385245 73 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 RPL6P29-201ENST00000414863 865 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 LINC01881-201ENST00000416103 412 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXC6P09630 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 AL365338.1-201ENST00000422282 858 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AL451062.2-201ENST00000427515 271 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.95□□□□□ -1.62
HOXC6P09630 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC6P09630 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 FABP5P3-201ENST00000437960 408 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 RPS26P2-201ENST00000440331 348 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 RAB28P3-201ENST00000448325 597 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXC6P09630 TPT1P3-201ENST00000492841 512 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 AC099522.1-202ENST00000514718 367 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC6P09630 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 AGGF1P6-201ENST00000569213 976 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC053481.3-201ENST00000577881 843 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 MIR4286-201ENST00000580651 93 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC091178.1-203ENST00000584586 279 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC6P09630 AC090181.2-201ENST00000602975 672 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC013444.2-201ENST00000603317 787 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 DUXAP3-201ENST00000603616 594 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AL365400.2-201ENST00000605604 902 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC008966.2-201ENST00000606157 453 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AL669942.2-201ENST00000620352 697 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC019080.5-201ENST00000624891 757 ntBASIC4.95□□□□□ -1.62
HOXC6P09630 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC6P09630 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC6P09630 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HOXC6P09630 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC6P09630 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC6P09630 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC6P09630 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC6P09630 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC6P09630 RNU6-468P-201ENST00000384003 109 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 RNU6-207P-201ENST00000384137 107 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 TAF9BP2-201ENST00000400856 499 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 RN7SKP159-201ENST00000410657 292 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 RNU2-22P-201ENST00000411266 212 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 VDAC1P9-201ENST00000412766 841 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 MTATP6P20-201ENST00000414147 562 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 MFSD13B-201ENST00000420133 1290 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 Z74021.1-201ENST00000423610 407 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 BX119904.1-201ENST00000432026 348 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC6P09630 AC092447.2-201ENST00000435487 669 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 UBE2V1P3-201ENST00000439651 417 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC6P09630 AL031313.1-201ENST00000448435 256 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC6P09630 SNORD11.1-201ENST00000459482 85 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 AC079804.1-201ENST00000461922 436 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 RPS17P11-201ENST00000474297 293 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 RN7SL132P-201ENST00000478131 296 ntBASIC4.94□□□□□ -1.62
HOXC6P09630 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC6P09630 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC6P09630 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms