Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RN7SKP82-201ENST00000516786 223 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.06□□□□□ -1.76
MT-ND1P03886 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.06□□□□□ -1.76
MT-ND1P03886 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.06□□□□□ -1.76
MT-ND1P03886 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.06□□□□□ -1.76
MT-ND1P03886 BNIP3P27-201ENST00000599991 412 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.06□□□□□ -1.76
MT-ND1P03886 AC079880.2-201ENST00000603790 1213 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 AC011458.1-201ENST00000604034 617 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 AC079610.2-201ENST00000604818 690 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 AL445528.2-201ENST00000620582 470 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 AC067931.1-201ENST00000624190 671 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 AC010872.1-201ENST00000624225 675 ntBASIC4.06□□□□□ -1.76
MT-ND1P03886 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.06□□□□□ -1.76
MT-ND1P03886 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
MT-ND1P03886 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.06□□□□□ -1.76
MT-ND1P03886 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MT-ND1P03886 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MT-ND1P03886 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
MT-ND1P03886 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MT-ND1P03886 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MT-ND1P03886 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 AL133243.3-201ENST00000617415 3004 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC100871.1-201ENST00000507871 1456 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AL049737.1-201ENST00000413920 1403 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.05□□□□□ -1.76
MT-ND1P03886 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.05□□□□□ -1.76
MT-ND1P03886 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.05□□□□□ -1.76
MT-ND1P03886 RNA5SP87-201ENST00000384155 118 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AL158825.1-201ENST00000414735 521 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 VN1R42P-201ENST00000424651 344 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.05□□□□□ -1.76
MT-ND1P03886 RPL23AP89-201ENST00000439324 255 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.05□□□□□ -1.76
MT-ND1P03886 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.05□□□□□ -1.76
MT-ND1P03886 AL121877.1-201ENST00000453704 622 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.05□□□□□ -1.76
MT-ND1P03886 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.05□□□□□ -1.76
MT-ND1P03886 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 RPL35AP15-201ENST00000468042 339 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.05□□□□□ -1.76
MT-ND1P03886 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.05□□□□□ -1.76
MT-ND1P03886 CAB39P1-201ENST00000502277 460 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 HMGB1P21-201ENST00000502313 581 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.05□□□□□ -1.76
MT-ND1P03886 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 AL352979.3-201ENST00000553515 247 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.05□□□□□ -1.76
MT-ND1P03886 AC067852.4-201ENST00000590314 478 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC133794.1-201ENST00000602731 914 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC010680.3-201ENST00000604215 520 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC115621.1-201ENST00000604653 858 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.05□□□□□ -1.76
MT-ND1P03886 AC011374.2-201ENST00000607135 526 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 OR6R2P-201ENST00000609216 300 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.05□□□□□ -1.76
MT-ND1P03886 MIR6891-201ENST00000618788 93 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 AL049777.1-201ENST00000622740 518 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 AC138907.10-201ENST00000623708 983 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 CDRT1-208ENST00000630868 794 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.05□□□□□ -1.76
MT-ND1P03886 AC009452.1-201ENST00000640823 606 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.05□□□□□ -1.76
MT-ND1P03886 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.05□□□□□ -1.76
MT-ND1P03886 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.05□□□□□ -1.76
MT-ND1P03886 HSPA8P19-201ENST00000505359 1517 ntBASIC4.05□□□□□ -1.76
MT-ND1P03886 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
MT-ND1P03886 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MT-ND1P03886 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
MT-ND1P03886 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
MT-ND1P03886 AL137100.1-201ENST00000556703 1620 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MT-ND1P03886 AC097374.1-203ENST00000400783 485 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 RN7SKP106-201ENST00000410832 272 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC004022.2-201ENST00000413824 193 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AL354692.1-201ENST00000423044 315 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.04□□□□□ -1.76
MT-ND1P03886 NDUFS5P3-201ENST00000450668 321 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC018638.3-201ENST00000461273 132 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 RPL32P14-201ENST00000463196 378 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.04□□□□□ -1.76
MT-ND1P03886 RN7SL585P-201ENST00000470538 280 ntBASIC4.04□□□□□ -1.76
MT-ND1P03886 RPL23AP71-201ENST00000470966 469 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms