Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.91□□□□□ -1.78
SEMA3DO95025 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.91□□□□□ -1.78
SEMA3DO95025 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.91□□□□□ -1.78
SEMA3DO95025 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SEMA3DO95025 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.91□□□□□ -1.78
SEMA3DO95025 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.91□□□□□ -1.78
SEMA3DO95025 AGGF1P8-201ENST00000562979 1000 ntBASIC3.91□□□□□ -1.78
SEMA3DO95025 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.91□□□□□ -1.78
SEMA3DO95025 AC009101.1-201ENST00000568135 242 ntBASIC3.91□□□□□ -1.78
SEMA3DO95025 AC079171.1-201ENST00000568788 914 ntBASIC3.91□□□□□ -1.78
SEMA3DO95025 RPL23AP87-202ENST00000573039 466 ntBASIC3.91□□□□□ -1.78
SEMA3DO95025 MIR4700-201ENST00000578311 74 ntBASIC3.91□□□□□ -1.78
SEMA3DO95025 AC110743.1-201ENST00000584870 478 ntBASIC3.91□□□□□ -1.78
SEMA3DO95025 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SEMA3DO95025 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.91□□□□□ -1.78
SEMA3DO95025 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.91□□□□□ -1.78
SEMA3DO95025 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEMA3DO95025 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.91□□□□□ -1.78
SEMA3DO95025 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SEMA3DO95025 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEMA3DO95025 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SEMA3DO95025 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEMA3DO95025 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SEMA3DO95025 HSPA8P1-201ENST00000425843 1833 ntBASIC3.91□□□□□ -1.78
SEMA3DO95025 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
SEMA3DO95025 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
SEMA3DO95025 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SEMA3DO95025 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SEMA3DO95025 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.78
SEMA3DO95025 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
SEMA3DO95025 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 RNU6-386P-201ENST00000362650 107 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.9□□□□□ -1.79
SEMA3DO95025 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.9□□□□□ -1.79
SEMA3DO95025 OR6C69P-201ENST00000394268 893 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 SNORA3C-201ENST00000408792 125 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 RN7SKP33-201ENST00000410942 340 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC092647.1-201ENST00000420654 287 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 AC007064.3-201ENST00000422608 359 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 OR6K4P-201ENST00000423179 955 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 RPL23AP38-201ENST00000423801 469 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 COX6CP15-201ENST00000426313 211 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.9□□□□□ -1.79
SEMA3DO95025 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.9□□□□□ -1.79
SEMA3DO95025 TPT1P13-201ENST00000449760 499 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC091917.2-201ENST00000505002 744 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 NDUFB4P9-201ENST00000511646 388 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.9□□□□□ -1.79
SEMA3DO95025 RAB9BP1-201ENST00000519581 626 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 MTND1P6-201ENST00000523621 946 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 OR7E10P-201ENST00000526420 991 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.9□□□□□ -1.79
SEMA3DO95025 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC012417.1-201ENST00000582307 1039 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.9□□□□□ -1.79
SEMA3DO95025 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC068020.1-201ENST00000594215 661 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC090246.1-201ENST00000616499 426 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.9□□□□□ -1.79
SEMA3DO95025 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.9□□□□□ -1.79
SEMA3DO95025 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SEMA3DO95025 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 AC100871.1-201ENST00000507871 1456 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 CCT8P1-201ENST00000413611 1657 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC017002.4-201ENST00000604721 1525 ntBASIC3.9□□□□□ -1.79
SEMA3DO95025 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SEMA3DO95025 AC005261.4-201ENST00000600047 1385 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.89□□□□□ -1.79
SEMA3DO95025 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.89□□□□□ -1.79
SEMA3DO95025 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SEMA3DO95025 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AL118496.1-201ENST00000440201 1812 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SEMA3DO95025 FAM3C2-201ENST00000312214 681 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SEMA3DO95025 FAR2P2-201ENST00000413041 594 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC108032.1-201ENST00000416706 207 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 TRGV6-201ENST00000417928 299 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 MTCO1P54-201ENST00000430139 712 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AL353093.1-201ENST00000441292 436 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms