Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 OLMALINC-203ENST00000641087 3779 ntBASIC7.42□□□□□ -1.22
RNF40O75150 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF40O75150 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF40O75150 CUBNP3-201ENST00000457461 1784 ntBASIC7.42□□□□□ -1.22
RNF40O75150 Y_RNA.291-201ENST00000364886 113 ntBASIC7.42□□□□□ -1.22
RNF40O75150 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF40O75150 RNU2-36P-201ENST00000410361 191 ntBASIC7.42□□□□□ -1.22
RNF40O75150 RN7SKP221-201ENST00000410420 301 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AL672212.1-201ENST00000422246 400 ntBASIC7.42□□□□□ -1.22
RNF40O75150 DUTP4-201ENST00000424782 475 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF40O75150 AC073900.1-201ENST00000429766 776 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC002381.1-201ENST00000447049 280 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC022080.2-201ENST00000452932 533 ntBASIC7.42□□□□□ -1.22
RNF40O75150 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 AC128716.1-201ENST00000475129 166 ntBASIC7.42□□□□□ -1.22
RNF40O75150 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 RN7SL655P-201ENST00000486087 298 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC034222.1-201ENST00000494052 532 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC063943.2-201ENST00000495697 534 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF40O75150 RNA5SP518-201ENST00000515957 119 ntBASIC7.42□□□□□ -1.22
RNF40O75150 RPL10P18-201ENST00000519384 309 ntBASIC7.42□□□□□ -1.22
RNF40O75150 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RNF40O75150 PMS2P3-207ENST00000529061 717 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC103843.2-201ENST00000530523 682 ntBASIC7.42□□□□□ -1.22
RNF40O75150 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 MIR3135A-201ENST00000578460 77 ntBASIC7.42□□□□□ -1.22
RNF40O75150 RPSAP66-201ENST00000592196 606 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF40O75150 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF40O75150 AC090525.3-201ENST00000605601 189 ntBASIC7.42□□□□□ -1.22
RNF40O75150 AC005858.3-201ENST00000624756 589 ntBASIC7.42□□□□□ -1.22
RNF40O75150 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF40O75150 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF40O75150 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF40O75150 TATDN2P3-201ENST00000452855 3665 ntBASIC7.42□□□□□ -1.22
RNF40O75150 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF40O75150 KPNA2P2-201ENST00000419546 1489 ntBASIC7.42□□□□□ -1.22
RNF40O75150 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF40O75150 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RNF40O75150 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF40O75150 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF40O75150 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RNF40O75150 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.41□□□□□ -1.22
RNF40O75150 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 Y_RNA.60-201ENST00000362831 98 ntBASIC7.41□□□□□ -1.22
RNF40O75150 RN7SKP47-201ENST00000365347 328 ntBASIC7.41□□□□□ -1.22
RNF40O75150 RNU6-744P-201ENST00000365557 107 ntBASIC7.41□□□□□ -1.22
RNF40O75150 SNORA75B-201ENST00000384053 137 ntBASIC7.41□□□□□ -1.22
RNF40O75150 RNU6-1316P-201ENST00000384242 108 ntBASIC7.41□□□□□ -1.22
RNF40O75150 MIR454-201ENST00000390180 115 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AL359715.1-201ENST00000404330 555 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AC099535.1-201ENST00000408928 371 ntBASIC7.41□□□□□ -1.22
RNF40O75150 RNU4-64P-201ENST00000410795 131 ntBASIC7.41□□□□□ -1.22
RNF40O75150 RN7SKP268-201ENST00000411107 316 ntBASIC7.41□□□□□ -1.22
RNF40O75150 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF40O75150 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF40O75150 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF40O75150 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 PUDPP2-201ENST00000431423 643 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AL845321.1-201ENST00000444603 348 ntBASIC7.41□□□□□ -1.22
RNF40O75150 MORF4-201ENST00000447135 971 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AL590664.1-201ENST00000448065 339 ntBASIC7.41□□□□□ -1.22
RNF40O75150 RPL23P10-201ENST00000468780 412 ntBASIC7.41□□□□□ -1.22
RNF40O75150 SNRPCP11-201ENST00000492453 205 ntBASIC7.41□□□□□ -1.22
RNF40O75150 RN7SL775P-201ENST00000498361 336 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AC018797.3-201ENST00000513388 1241 ntBASIC7.41□□□□□ -1.22
RNF40O75150 Y_RNA.661-201ENST00000516003 99 ntBASIC7.41□□□□□ -1.22
RNF40O75150 IGLV1-62-201ENST00000518003 441 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF40O75150 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF40O75150 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RNF40O75150 GNAI2P1-201ENST00000541815 315 ntBASIC7.41□□□□□ -1.22
RNF40O75150 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF40O75150 MIR4470-201ENST00000583453 72 ntBASIC7.41□□□□□ -1.22
RNF40O75150 MIR3672-201ENST00000584290 82 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AC067852.5-201ENST00000589299 310 ntBASIC7.41□□□□□ -1.22
RNF40O75150 AL591167.1-201ENST00000607321 456 ntBASIC7.41□□□□□ -1.22
RNF40O75150 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 AC006116.1-201ENST00000587908 2171 ntBASIC7.41□□□□□ -1.22
RNF40O75150 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.41□□□□□ -1.22
RNF40O75150 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 AL136531.3-201ENST00000624378 3658 ntBASIC7.41□□□□□ -1.22
RNF40O75150 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 AL355377.1-201ENST00000621125 1653 ntBASIC7.41□□□□□ -1.22
RNF40O75150 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF40O75150 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms