Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 RPL23AP37-201ENST00000479658 549 ntBASIC4.23□□□□□ -1.73
PRKNO60260 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 RPS4XP18-201ENST00000495480 763 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC023424.1-201ENST00000496058 459 ntBASIC4.23□□□□□ -1.73
PRKNO60260 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.23□□□□□ -1.73
PRKNO60260 PRELID3BP4-201ENST00000515476 571 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 AC083923.1-201ENST00000523708 376 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.23□□□□□ -1.73
PRKNO60260 MTATP6P15-201ENST00000527233 835 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.23□□□□□ -1.73
PRKNO60260 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 AC068831.4-201ENST00000556118 109 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 MIR5096-201ENST00000583713 70 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 AC125494.3-201ENST00000602759 455 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 AC107952.2-201ENST00000606048 486 ntBASIC4.23□□□□□ -1.73
PRKNO60260 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKNO60260 AC009237.15-201ENST00000610252 501 ntBASIC4.23□□□□□ -1.73
PRKNO60260 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.23□□□□□ -1.73
PRKNO60260 AL133243.1-201ENST00000614487 366 ntBASIC4.23□□□□□ -1.73
PRKNO60260 STMN1P1-201ENST00000617809 440 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC022079.1-201ENST00000621546 602 ntBASIC4.23□□□□□ -1.73
PRKNO60260 AC024595.1-201ENST00000623088 387 ntBASIC4.23□□□□□ -1.73
PRKNO60260 U6.107-201ENST00000637108 79 ntBASIC4.23□□□□□ -1.73
PRKNO60260 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 MTND4P10-201ENST00000446199 1363 ntBASIC4.23□□□□□ -1.73
PRKNO60260 MTND4P8-201ENST00000514997 1362 ntBASIC4.23□□□□□ -1.73
PRKNO60260 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKNO60260 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKNO60260 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKNO60260 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRKNO60260 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 IGKV7-3-201ENST00000357453 298 ntBASIC4.22□□□□□ -1.73
PRKNO60260 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.22□□□□□ -1.73
PRKNO60260 RNU4-51P-201ENST00000364206 140 ntBASIC4.22□□□□□ -1.73
PRKNO60260 SNORA62.2-201ENST00000364672 152 ntBASIC4.22□□□□□ -1.73
PRKNO60260 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 RNU6-98P-201ENST00000384173 107 ntBASIC4.22□□□□□ -1.73
PRKNO60260 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRKNO60260 MTCO1P56-201ENST00000401674 224 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 RPL21P43-201ENST00000425440 472 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AL732292.1-201ENST00000426692 226 ntBASIC4.22□□□□□ -1.73
PRKNO60260 NANOGP2-201ENST00000435391 727 ntBASIC4.22□□□□□ -1.73
PRKNO60260 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 AP000936.3-201ENST00000438127 255 ntBASIC4.22□□□□□ -1.73
PRKNO60260 MTCYBP42-201ENST00000444653 1130 ntBASIC4.22□□□□□ -1.73
PRKNO60260 MRPL48P1-201ENST00000445390 636 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC005002.1-201ENST00000447458 540 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKNO60260 CDC42P1-201ENST00000456658 548 ntBASIC4.22□□□□□ -1.73
PRKNO60260 MTND2P28-201ENST00000457540 1044 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC013356.1-201ENST00000489027 564 ntBASIC4.22□□□□□ -1.73
PRKNO60260 RN7SL346P-201ENST00000491561 294 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKNO60260 AC091860.1-201ENST00000505723 432 ntBASIC4.22□□□□□ -1.73
PRKNO60260 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKNO60260 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 AC104108.1-201ENST00000509930 412 ntBASIC4.22□□□□□ -1.73
PRKNO60260 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 snoU109.6-201ENST00000516831 118 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 RAB9BP1-201ENST00000519581 626 ntBASIC4.22□□□□□ -1.73
PRKNO60260 C1GALT1P3-201ENST00000522049 819 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKNO60260 DEFB130C-202ENST00000530001 230 ntBASIC4.22□□□□□ -1.73
PRKNO60260 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKNO60260 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKNO60260 MRPS36P5-201ENST00000551909 298 ntBASIC4.22□□□□□ -1.73
PRKNO60260 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRKNO60260 AC023813.2-201ENST00000564321 469 ntBASIC4.22□□□□□ -1.73
PRKNO60260 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKNO60260 AC022884.3-201ENST00000579571 248 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms