Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC119744.1-201ENST00000454746 1715 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 AC083899.2-201ENST00000423285 1376 ntBASIC4.52□□□□□ -1.69
CCDC188H7C350 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CCDC188H7C350 AC104446.1-201ENST00000613728 1321 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC073055.1-201ENST00000456901 1621 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC188H7C350 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC188H7C350 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC188H7C350 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC022031.1-201ENST00000585985 2593 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC188H7C350 RNU6-354P-201ENST00000383862 107 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 RNU6-610P-201ENST00000384264 107 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 MIR659-201ENST00000384963 97 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC073136.2-201ENST00000417282 849 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC246680.2-201ENST00000422106 389 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC188H7C350 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC188H7C350 RPL30P11-201ENST00000495304 339 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC188H7C350 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC188H7C350 ATP1B1P1-201ENST00000509767 915 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AC112206.4-201ENST00000515142 405 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AF186190.1-201ENST00000517470 480 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC188H7C350 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AP000827.1-201ENST00000527814 258 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC188H7C350 AL442163.2-201ENST00000553912 710 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AC017076.1-201ENST00000607613 578 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AC016542.1-201ENST00000608259 493 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AC004948.1-201ENST00000609858 672 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AC131238.1-201ENST00000617135 328 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC188H7C350 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC188H7C350 MAPK10-253ENST00000641010 4072 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 AC046144.1-201ENST00000478559 1853 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC188H7C350 A2MP1-204ENST00000566278 4130 ntBASIC4.51□□□□□ -1.69
CCDC188H7C350 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC188H7C350 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC188H7C350 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC188H7C350 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC188H7C350 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC188H7C350 RNA5SP397-201ENST00000391323 118 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 SNORA11C-201ENST00000408532 129 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC188H7C350 EIF1P3-201ENST00000423841 334 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC188H7C350 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC188H7C350 RPS26P40-201ENST00000435209 294 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC188H7C350 RPL23AP89-201ENST00000439324 255 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC188H7C350 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC188H7C350 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC188H7C350 RPS17P11-201ENST00000474297 293 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 RPS4XP6-201ENST00000477670 797 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AC104164.2-201ENST00000496953 495 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC188H7C350 PGBD4P4-201ENST00000509673 613 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 MTCO3P27-201ENST00000514397 196 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC188H7C350 AP003355.1-201ENST00000518956 587 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC188H7C350 PDCD5P1-201ENST00000543528 309 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC188H7C350 OR1F2P-201ENST00000570470 933 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 RN7SL622P-201ENST00000585292 275 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC188H7C350 AC079587.1-201ENST00000603846 277 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 AC253576.2-201ENST00000618815 580 ntBASIC4.5□□□□□ -1.69
CCDC188H7C350 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC188H7C350 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC188H7C350 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC188H7C350 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC188H7C350 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC188H7C350 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AL049737.1-201ENST00000413920 1403 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms