Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 NANOGNBP1-201ENST00000448444 480 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 MTND6P32-201ENST00000457611 483 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 RPL21P8-201ENST00000465083 535 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 Vault.1-201ENST00000516474 102 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 AC084759.1-201ENST00000561168 290 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 AC007599.1-201ENST00000568688 1174 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 AC006504.3-201ENST00000586818 523 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 BNIP3P41-202ENST00000616656 861 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 RPL7AP73-201ENST00000413490 353 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 HSPE1P16-201ENST00000426640 348 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 AL033523.1-201ENST00000605153 153 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 MIR7154-201ENST00000620673 73 ntBASIC4.78□□□□□ -1.64
RGPD3A6NKT7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RGPD3A6NKT7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 AC068790.5-201ENST00000602741 355 ntBASIC4.77□□□□□ -1.65
RGPD3A6NKT7 AL583832.1-201ENST00000603227 784 ntBASIC4.77□□□□□ -1.65
RGPD3A6NKT7 AL139089.1-201ENST00000620372 975 ntBASIC4.77□□□□□ -1.65
RGPD3A6NKT7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RGPD3A6NKT7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 SNORA38.1-201ENST00000364172 131 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 U3.19-201ENST00000390893 196 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC073335.1-201ENST00000427776 363 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AL671855.1-201ENST00000446875 1203 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 OR52Y1P-201ENST00000452418 828 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC096576.1-201ENST00000489014 359 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 RAC1P2-201ENST00000511164 579 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC026979.4-201ENST00000606555 645 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AL034403.1-201ENST00000399414 885 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AC010591.1-201ENST00000603941 649 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 AL354976.1-201ENST00000613843 387 ntBASIC4.76□□□□□ -1.65
RGPD3A6NKT7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
RGPD3A6NKT7 Z95327.2-201ENST00000414579 1873 ntBASIC4.75□□□□□ -1.65
RGPD3A6NKT7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RGPD3A6NKT7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RGPD3A6NKT7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.75□□□□□ -1.65
RGPD3A6NKT7 SEPT7P8-201ENST00000413308 775 ntBASIC4.75□□□□□ -1.65
RGPD3A6NKT7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RGPD3A6NKT7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.75□□□□□ -1.65
RGPD3A6NKT7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.75□□□□□ -1.65
RGPD3A6NKT7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms