Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 DPPA2P4-201ENST00000563717 878 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC087752.4-201ENST00000605911 462 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC015914.2-201ENST00000618167 288 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC124312.6-202ENST00000623624 418 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC015726.3-201ENST00000624501 418 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 MKKS-204ENST00000639674 192 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC027228.2-201ENST00000567141 2154 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 Y_RNA.3-201ENST00000362331 103 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RNA5SP435-201ENST00000364044 108 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 CYCSP45-201ENST00000402289 315 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AL133264.1-201ENST00000407157 562 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RAD23BP2-201ENST00000416003 1207 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AL133325.1-201ENST00000421090 382 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RPS3P2-201ENST00000421346 701 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RPS29P14-201ENST00000431518 171 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 CDC27P1-201ENST00000445384 715 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 OR6C5P-201ENST00000452388 923 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC010307.1-201ENST00000467206 836 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RN7SL583P-201ENST00000475692 287 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 RNU6-885P-201ENST00000516607 104 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC060775.1-201ENST00000518241 520 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 MRPS16P1-201ENST00000523462 412 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 NANOGNBP2-201ENST00000544753 553 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC012414.6-201ENST00000568241 401 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC087683.1-201ENST00000591187 441 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC010678.1-201ENST00000614118 713 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 MAPK10-320ENST00000641462 6696 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 LINC01963-201ENST00000562038 3148 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC66A2RUB6 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.79□□□□□ -1.48
CCDC66A2RUB6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 AL121657.1-201ENST00000327215 531 ntBASIC5.78□□□□□ -1.48
CCDC66A2RUB6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC66A2RUB6 RNU6-1119P-201ENST00000384349 108 ntBASIC5.78□□□□□ -1.48
CCDC66A2RUB6 RNU6-517P-201ENST00000384362 110 ntBASIC5.78□□□□□ -1.48
CCDC66A2RUB6 RNU6-1215P-201ENST00000384441 102 ntBASIC5.78□□□□□ -1.48
CCDC66A2RUB6 AC092642.1-201ENST00000392417 425 ntBASIC5.78□□□□□ -1.48
CCDC66A2RUB6 DEFB108C-201ENST00000400154 252 ntBASIC5.78□□□□□ -1.48
CCDC66A2RUB6 AC068533.2-201ENST00000411872 306 ntBASIC5.78□□□□□ -1.48
CCDC66A2RUB6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms