Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC016588.2-201ENST00000632484 3021 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 MIR153-1-201ENST00000384914 90 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 CYB5AP4-201ENST00000396692 399 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC097374.1-203ENST00000400783 485 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 RNU4-74P-201ENST00000411280 161 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC119751.6-201ENST00000416712 186 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC234782.4-201ENST00000417646 1048 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 RPL23AP89-201ENST00000439324 255 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 XKRYP6-201ENST00000440468 1116 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 XKRYP3-201ENST00000442113 1116 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 HMGB1P5-202ENST00000451497 985 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 TVP23BP2-201ENST00000455082 615 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC146507.1-201ENST00000468335 354 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC107398.1-201ENST00000486904 505 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 CENPUP2-201ENST00000555897 1186 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 ADAM3B-201ENST00000569937 840 ntBASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.74□□□□□ -1.81
RHBDD3Q9Y3P4 AC010300.1-201ENST00000600671 5134 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 OR5P1P-201ENST00000299512 925 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 MIR331-201ENST00000362302 94 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RNU6-152P-201ENST00000384037 107 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RNU6-356P-201ENST00000384140 107 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RNU6-398P-201ENST00000384143 109 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 MIR129-1-201ENST00000384972 72 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP332-201ENST00000391063 115 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RPL23AP59-201ENST00000399415 461 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RPS3AP23-201ENST00000401762 784 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 MIR1183-201ENST00000408856 89 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP104-201ENST00000410989 118 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AL356387.2-201ENST00000422272 243 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 MTCO1P57-201ENST00000432182 261 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 ELOCP18-201ENST00000434209 337 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC104306.1-201ENST00000449702 371 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 MTND2P28-201ENST00000457540 1044 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 RPL5P23-201ENST00000496040 868 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AK3P4-201ENST00000504283 583 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC139783.2-201ENST00000504847 1145 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC108157.1-201ENST00000510511 539 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC023141.12-201ENST00000512399 199 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC074029.1-201ENST00000552531 1044 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 POLR2KP1-201ENST00000553226 168 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AL021997.2-201ENST00000615674 271 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 MIR6864-201ENST00000617935 70 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC024023.1-201ENST00000624530 922 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 CDRT1-208ENST00000630868 794 ntBASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AC012618.3-205ENST00000637896 1496 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms