Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RAP1BP1-201ENST00000412709 553 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC019050.1-201ENST00000418508 492 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC104333.2-201ENST00000422630 192 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC012519.1-201ENST00000424588 610 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 DNAJC19P7-201ENST00000428811 344 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 VN1R108P-201ENST00000431580 830 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 IMPA1P1-201ENST00000510718 842 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 RNU6-1129P-201ENST00000515964 104 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 HMGB1P19-201ENST00000517578 577 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC090819.1-201ENST00000523800 1111 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC122134.1-201ENST00000565664 1104 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 SS18L2P2-201ENST00000583960 235 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AP001542.2-201ENST00000593141 364 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 MRPS35P3-201ENST00000603189 709 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AL358072.1-201ENST00000604156 575 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AL583856.2-201ENST00000606298 543 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AL135786.2-201ENST00000608422 615 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AP000255.1-201ENST00000610276 676 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 VN1R7P-201ENST00000619242 903 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AP000346.3-201ENST00000622821 210 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 A2MP1-204ENST00000566278 4130 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC005261.4-201ENST00000600047 1385 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 SAMMSON-226ENST00000642089 1582 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 NACA3P-201ENST00000359690 648 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 RNU6-543P-201ENST00000362576 108 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 RPS3AP23-201ENST00000401762 784 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 MIR1302-8-201ENST00000408342 128 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 SNORA77-201ENST00000408716 125 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 RN7SKP182-201ENST00000410772 298 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 RN7SKP100-201ENST00000411258 284 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 RPL12P9-201ENST00000412942 488 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 YWHAEP5-201ENST00000431545 765 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AL359265.2-201ENST00000434367 631 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 RPS29P9-201ENST00000440360 171 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AL445669.2-201ENST00000454425 421 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 ANKRD26P4-201ENST00000455755 950 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC087373.1-201ENST00000524920 491 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms