Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA1Q9UND3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA1Q9UND3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPIPA1Q9UND3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 EIF2AP4-201ENST00000424793 1781 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 RAD1P1-201ENST00000231383 813 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 RNU1-94P-201ENST00000362627 173 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 RNU1-132P-201ENST00000364300 164 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 RNA5SP22-201ENST00000365393 109 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 RNA5SP151-201ENST00000365632 117 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL078604.1-201ENST00000404609 466 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL353692.2-201ENST00000407054 335 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 PDSS1P1-201ENST00000422953 1114 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 KCTD10P1-201ENST00000434203 625 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 TPMTP4-201ENST00000450749 678 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL121877.1-201ENST00000453704 622 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 CABYRP1-201ENST00000465493 1045 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC090013.1-201ENST00000485147 480 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC041039.1-201ENST00000485656 536 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC108475.1-201ENST00000507880 950 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC134698.5-201ENST00000519444 336 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 TVP23BP1-201ENST00000557500 617 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 MIR4716-201ENST00000579628 84 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC115085.1-201ENST00000588924 229 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC024941.1-201ENST00000612250 334 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL138721.1-201ENST00000616756 179 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AC007546.2-201ENST00000623996 360 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 CR392039.4-201ENST00000624968 501 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 CFTRP2-201ENST00000634304 199 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NPIPA1Q9UND3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA1Q9UND3 AL353743.4-201ENST00000422653 1547 ntBASIC4□□□□□ -1.77
NPIPA1Q9UND3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC012020.1-201ENST00000624541 1728 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 MIR3065-201ENST00000390137 79 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 RN7SKP27-201ENST00000410684 333 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 RPS20P14-201ENST00000412545 360 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AL035458.1-201ENST00000433096 585 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 TPTE2P6-202ENST00000445572 1007 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 RPS7P7-201ENST00000463499 571 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 RPL7AP28-201ENST00000464513 571 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC104687.1-201ENST00000485829 412 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC111193.1-201ENST00000504097 155 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 SNORA31.13-201ENST00000516624 135 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AP002812.4-201ENST00000532139 286 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AL109618.2-201ENST00000605527 211 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 Z98200.1-201ENST00000607298 470 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AL353726.1-201ENST00000614041 1000 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AL354696.1-201ENST00000614652 497 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AC123768.4-201ENST00000616244 701 ntBASIC3.99□□□□□ -1.77
NPIPA1Q9UND3 AP006248.2-201ENST00000623309 592 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms