Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 HMGB1P5-202ENST00000451497 985 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 KCTD9P2-201ENST00000512203 1013 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC027338.1-201ENST00000514840 825 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC011471.1-201ENST00000585766 187 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 MIR6500-201ENST00000622700 86 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC105074.1-201ENST00000623380 3095 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 FAM91A3P-201ENST00000456826 2544 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC062016.2-201ENST00000420950 676 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 NPM1P29-201ENST00000483112 803 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 ACTR3BP4-201ENST00000503033 1244 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 RNA5SP360-201ENST00000516555 118 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 RNU6-467P-201ENST00000517027 110 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AL352979.3-201ENST00000553515 247 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 RPL21P136-201ENST00000605378 396 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 AC023813.4-201ENST00000607580 580 ntBASIC8□□□□□ -1.13
SHROOM4Q9ULL8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC8□□□□□ -1.13
SHROOM4Q9ULL8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 MIR320B1-201ENST00000390209 79 ntBASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 HMGN2P27-201ENST00000427352 270 ntBASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 AC108729.2-201ENST00000476543 840 ntBASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 LSM3P2-201ENST00000551246 273 ntBASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 AL022311.1-201ENST00000623726 19416 ntBASIC7.99□□□□□ -1.13
SHROOM4Q9ULL8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 AC005005.4-201ENST00000623789 16698 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 RNU1-20P-201ENST00000363314 162 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 RNU6-244P-201ENST00000391028 104 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 RNU7-27P-201ENST00000459281 62 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 AC090013.1-201ENST00000485147 480 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 OSBPL9P3-201ENST00000534523 595 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 AL391834.1-201ENST00000609609 560 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 MAPK10-286ENST00000641208 8747 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 AL512283.1-201ENST00000606756 1384 ntBASIC7.98□□□□□ -1.13
SHROOM4Q9ULL8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC125336.1-201ENST00000508893 2827 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 Z95331.1-201ENST00000623075 23112 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC092435.3-201ENST00000565538 3654 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 MIR183-201ENST00000384958 110 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 TATDN1P1-201ENST00000414123 891 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 ARL2BPP3-201ENST00000421226 480 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC073508.1-201ENST00000428866 656 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AL590762.3-201ENST00000436372 640 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 CYCSP53-201ENST00000455540 265 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 IGKV2D-19-201ENST00000523346 262 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC008083.2-201ENST00000546707 476 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC107016.1-201ENST00000550463 337 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 GTF2IP22-201ENST00000554443 182 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 MTND4LP25-201ENST00000570218 163 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC027455.1-201ENST00000574104 594 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC022655.2-201ENST00000577280 318 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC005972.3-201ENST00000606304 481 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 AC015871.5-202ENST00000623252 701 ntBASIC7.97□□□□□ -1.13
SHROOM4Q9ULL8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms