Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 CYCSP43-201ENST00000438233 310 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 TPTE2P3-201ENST00000441562 1189 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC008155.2-201ENST00000464337 397 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 RN7SL585P-201ENST00000470538 280 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC026726.1-201ENST00000512859 601 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC084759.1-201ENST00000561168 290 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC244517.3-201ENST00000616254 1235 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC009237.17-201ENST00000618111 748 ntBASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
KIAA1549Q9HCM3 BDP1P-201ENST00000582658 1990 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC006042.3-201ENST00000454684 1469 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AL121834.1-202ENST00000404494 277 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 RN7SKP159-201ENST00000410657 292 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 Z97055.1-201ENST00000419730 712 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 UBDP1-202ENST00000457888 382 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 CDH12P2-201ENST00000504393 298 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 MYL12AP1-201ENST00000518490 515 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AL161756.2-201ENST00000604597 246 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC131238.1-201ENST00000617135 328 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC244100.1-202ENST00000621554 382 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC079298.2-201ENST00000623885 459 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AP003400.2-201ENST00000624036 666 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC011503.2-201ENST00000594230 1500 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 NANOGP6-201ENST00000429190 847 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 snoU13.22-201ENST00000459428 104 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC006511.1-201ENST00000470614 315 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC109458.1-201ENST00000508858 316 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC007390.2-201ENST00000606229 3803 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC090912.3-201ENST00000609775 533 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC006840.1-201ENST00000623069 542 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 AC020978.9-201ENST00000624380 1141 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 CASC19-284ENST00000642142 1868 ntBASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.45□□□□□ -1.86
KIAA1549Q9HCM3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 DDX18P3-201ENST00000404856 2007 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 RNA5SP51-201ENST00000364750 119 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 AC007066.1-201ENST00000392902 381 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 TCEA1P4-201ENST00000415066 844 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 AL157884.3-201ENST00000448273 1184 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 HMGB3P13-201ENST00000511263 607 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 RNA5SP164-201ENST00000516533 110 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 IGKV2-38-201ENST00000517443 247 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 AC017100.2-201ENST00000584628 355 ntBASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KIAA1549Q9HCM3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms