Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR5004-201ENST00000579078 107 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 RPL26P28-201ENST00000451325 435 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC103710.3-201ENST00000608157 948 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 OR51C1P-201ENST00000608504 942 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AL392088.2-201ENST00000637607 285 ntBASIC3.64□□□□□ -1.83
CHD8Q9HCK8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHD8Q9HCK8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 SNORA70B-201ENST00000384210 135 ntBASIC3.63□□□□□ -1.83
CHD8Q9HCK8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 RPL7P1-201ENST00000468161 747 ntBASIC3.63□□□□□ -1.83
CHD8Q9HCK8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 AC005831.1-201ENST00000624384 1697 ntBASIC3.63□□□□□ -1.83
CHD8Q9HCK8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 XGY1-201ENST00000381172 446 ntBASIC3.63□□□□□ -1.83
CHD8Q9HCK8 TXNP1-201ENST00000441872 371 ntBASIC3.63□□□□□ -1.83
CHD8Q9HCK8 RPS20P22-201ENST00000473700 357 ntBASIC3.63□□□□□ -1.83
CHD8Q9HCK8 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 VN1R104P-201ENST00000505115 1009 ntBASIC3.63□□□□□ -1.83
CHD8Q9HCK8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD8Q9HCK8 Y_RNA.508-201ENST00000384502 114 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AC092447.2-201ENST00000435487 669 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 BTF3P5-201ENST00000457252 467 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 RN7SL197P-201ENST00000466981 299 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AC055855.1-201ENST00000489563 579 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AC111000.6-201ENST00000514471 709 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 RNU1-30P-201ENST00000606575 163 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AC138907.10-201ENST00000623708 983 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AL137790.1-201ENST00000634283 177 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 Y_RNA.796-201ENST00000364268 102 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 Y_RNA.799-201ENST00000364992 102 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 NPM1P47-201ENST00000560843 856 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AC133552.5-201ENST00000604266 540 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms