Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC114878.2-201ENST00000604863 1251 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC116651.1-201ENST00000609724 556 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC015804.1-201ENST00000622935 435 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 AC026422.1-201ENST00000623961 452 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 MIR4278-201ENST00000636094 69 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HPS3Q969F9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.49□□□□□ -1.53
HPS3Q969F9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HPS3Q969F9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.49□□□□□ -1.53
HPS3Q969F9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.49□□□□□ -1.53
HPS3Q969F9 AL031595.2-201ENST00000624215 19071 ntBASIC5.49□□□□□ -1.53
HPS3Q969F9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS3Q969F9 AC009643.2-201ENST00000603543 1448 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 USP9YP4-201ENST00000424401 1745 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS3Q969F9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS3Q969F9 AP000756.2-201ENST00000624168 2567 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HPS3Q969F9 AC005539.1-201ENST00000443768 1479 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.48□□□□□ -1.53
HPS3Q969F9 RNU6-1066P-201ENST00000363573 105 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RNU4-4P-201ENST00000364588 130 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HPS3Q969F9 MIR217-201ENST00000384817 110 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HPS3Q969F9 RNU6-1300P-201ENST00000391046 108 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL645927.1-201ENST00000396783 406 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RN7SKP247-201ENST00000411094 308 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 MTND4P22-201ENST00000413116 1169 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RPL23AP27-201ENST00000415161 451 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL365338.1-201ENST00000422282 858 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 Z93242.1-201ENST00000427102 353 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.48□□□□□ -1.53
HPS3Q969F9 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.48□□□□□ -1.53
HPS3Q969F9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL772161.1-201ENST00000439130 476 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 MTND3P1-201ENST00000441336 220 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS3Q969F9 RPL7P59-201ENST00000447700 943 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS3Q969F9 snoU13.20-201ENST00000459180 104 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AP000942.1-201ENST00000463969 747 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RN7SL826P-201ENST00000479724 288 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RN7SL244P-201ENST00000493405 297 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AC023424.1-201ENST00000496058 459 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AC073358.1-201ENST00000505671 684 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS3Q969F9 RPL7L1P13-201ENST00000511702 739 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 MRPS33P3-201ENST00000513456 322 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS3Q969F9 RNU6-513P-201ENST00000516104 104 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RN7SKP66-201ENST00000516681 231 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RN7SKP147-201ENST00000517154 244 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HPS3Q969F9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HPS3Q969F9 MTCO1P47-201ENST00000523889 1271 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HPS3Q969F9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HPS3Q969F9 GCSHP4-201ENST00000538792 439 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HPS3Q969F9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS3Q969F9 NMNAT1P1-201ENST00000554095 876 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 DUXAP1-201ENST00000556632 463 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS3Q969F9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.48□□□□□ -1.53
HPS3Q969F9 GTF2IP8-201ENST00000560687 584 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL031281.1-201ENST00000604049 488 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AC104687.2-201ENST00000604442 342 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 AL360219.1-201ENST00000610230 366 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 VIS1.1-201ENST00000610517 203 ntBASIC5.48□□□□□ -1.53
HPS3Q969F9 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.48□□□□□ -1.53
HPS3Q969F9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS3Q969F9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS3Q969F9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HPS3Q969F9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS3Q969F9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HPS3Q969F9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS3Q969F9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.47□□□□□ -1.53
HPS3Q969F9 SCARNA15-201ENST00000607520 4325 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 AC107027.3-201ENST00000565095 3473 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
HPS3Q969F9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HPS3Q969F9 SNORA73.1-201ENST00000363107 205 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.47□□□□□ -1.53
HPS3Q969F9 RNU6-1151P-201ENST00000384684 107 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AL161909.1-201ENST00000397390 712 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 RN7SKP213-201ENST00000410746 298 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS3Q969F9 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS3Q969F9 MTND4P20-201ENST00000424125 869 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms