Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 RNU6-83P-201ENST00000384568 112 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 SNORA48.4-201ENST00000391089 134 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 RNA5SP241-201ENST00000391326 114 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LRRC37BP1-201ENST00000398851 714 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 RSU1P3-201ENST00000412878 835 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC114755.2-201ENST00000413520 361 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC007435.1-201ENST00000421086 415 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC009965.2-201ENST00000425328 970 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 MTCO1P54-201ENST00000430139 712 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 ARL2BPP10-201ENST00000446487 531 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 CEACAMP6-201ENST00000452007 574 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 RPS23P7-201ENST00000466210 444 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC104689.1-201ENST00000473356 768 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 MTND2P14-201ENST00000482139 351 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 TCP11X3P-202ENST00000514289 1254 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AP001636.2-201ENST00000525517 696 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC145350.1-201ENST00000567426 208 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AP000255.1-201ENST00000610276 676 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 DCAF13P3-201ENST00000561147 1334 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 AC006484.1-201ENST00000435086 1884 ntBASIC4.92□□□□□ -1.62
HMGB4Q8WW32 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGB4Q8WW32 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AC063976.2-201ENST00000425667 3556 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AL445437.1-201ENST00000623157 3087 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RNU6-1214P-201ENST00000363650 109 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 MIR217-201ENST00000384817 110 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 SNORD65.1-201ENST00000390889 71 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AL357515.1-201ENST00000402967 542 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RNU6-272P-201ENST00000411028 104 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AL136231.1-201ENST00000429407 730 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RPS26P40-201ENST00000435209 294 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 COX7BP2-201ENST00000437976 242 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AC016831.4-201ENST00000438302 307 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AL691482.1-201ENST00000453255 87 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RN7SL441P-201ENST00000492388 296 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AC093755.1-201ENST00000512950 1023 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RNU5A-4P-201ENST00000516588 111 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RNA5SP392-201ENST00000516905 112 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 HIGD1AP6-201ENST00000521833 279 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 OR5M2P-201ENST00000529003 936 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AC133555.2-201ENST00000550213 292 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 DUXAP6-201ENST00000553858 601 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 PARP1P2-201ENST00000556806 195 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 ATP5J2P6-201ENST00000565203 266 ntBASIC4.91□□□□□ -1.62
HMGB4Q8WW32 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGB4Q8WW32 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms