Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 OR13C3-201ENST00000374781 1108 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 RNU6-167P-201ENST00000384292 106 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 MIR23B-201ENST00000384832 97 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC073136.2-201ENST00000417282 849 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AL138787.1-202ENST00000437804 898 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC239809.1-201ENST00000450470 217 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 RNU1-45P-201ENST00000517191 141 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC063950.1-201ENST00000552036 308 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC120057.2-201ENST00000571520 271 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC064801.1-201ENST00000612025 407 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 AC015722.2-201ENST00000622210 551 ntBASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDND2Q8NHS1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 SNORA60-201ENST00000362396 134 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC104297.1-201ENST00000393779 870 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AL138878.1-201ENST00000405131 347 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 CYCSP19-201ENST00000411715 316 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 MTCO1P51-201ENST00000427672 1060 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 HMGB3P5-201ENST00000428894 612 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC011742.1-201ENST00000431448 434 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 RN7SL542P-201ENST00000467147 294 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 NARSP2-201ENST00000518524 679 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC092851.1-201ENST00000535964 478 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 MIR5684-201ENST00000585074 65 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AL139286.1-201ENST00000604465 483 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AC245389.1-201ENST00000605141 529 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AP003392.5-201ENST00000607857 415 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AL392048.1-201ENST00000613946 534 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 AL450326.2-201ENST00000421913 1962 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 FAM91A3P-201ENST00000456826 2544 ntBASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
CLDND2Q8NHS1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLDND2Q8NHS1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.4□□□□□ -1.86
CLDND2Q8NHS1 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 RPL5P19-201ENST00000404228 893 ntBASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 RN7SKP159-201ENST00000410657 292 ntBASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 BMS1P19-201ENST00000433925 393 ntBASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 RPL36AP13-201ENST00000457490 317 ntBASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 RPL29P14-201ENST00000495837 428 ntBASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.4□□□□□ -1.87
CLDND2Q8NHS1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms