Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 AC097063.1-201ENST00000426714 1797 ntBASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 SGO1P1-201ENST00000603525 1447 ntBASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF548Q8NEK5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 MTND4P4-201ENST00000439033 1366 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 MTND4P10-201ENST00000446199 1363 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 ELL2P3-201ENST00000457883 1602 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 RLIMP2-201ENST00000427891 1563 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 MTCO1P7-201ENST00000419523 1542 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 FAM133CP-201ENST00000332869 704 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 RNU1-87P-201ENST00000363727 170 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 SNORD65C-201ENST00000390962 71 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 RNA5SP332-201ENST00000391063 115 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC114755.2-201ENST00000413520 361 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 TMBIM7P-201ENST00000418074 855 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 FTLP19-201ENST00000433300 394 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AL031584.1-201ENST00000447169 754 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 RPL7P32-201ENST00000457119 744 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC023050.1-201ENST00000498198 304 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC024909.2-201ENST00000553035 286 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC022662.1-201ENST00000580252 331 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AP001269.3-201ENST00000588718 329 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC105129.3-201ENST00000605455 485 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC135507.1-201ENST00000607214 561 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AP003392.5-201ENST00000607857 415 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 MIR6853-201ENST00000619642 74 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC007490.1-201ENST00000624321 703 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 NCLP2-201ENST00000416078 1462 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC010928.1-201ENST00000592477 1447 ntBASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF548Q8NEK5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 AC104446.1-201ENST00000613728 1321 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 U3.30-201ENST00000391308 210 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 RSL24D1P4-201ENST00000400938 484 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 AL357515.1-201ENST00000402967 542 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 AL590084.1-201ENST00000407885 387 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 Y_RNA.599-201ENST00000410489 109 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 SETP15-201ENST00000412724 337 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 RSU1P3-201ENST00000412878 835 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 BTF3P8-201ENST00000414577 526 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 TIMM9P2-201ENST00000419324 266 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 PTP4A1P5-201ENST00000420305 455 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 MTND4P20-201ENST00000424125 869 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 GTF2IP2-201ENST00000424290 697 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 HIGD1AP12-201ENST00000427832 281 ntBASIC4.78□□□□□ -1.64
ZNF548Q8NEK5 ISCA1P2-201ENST00000438679 421 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms