Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.73□□□□□ -1.33
NPAS3Q8IXF0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
NPAS3Q8IXF0 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RN7SKP78-201ENST00000364711 318 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 LCN1P2-201ENST00000372030 223 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RNU6-1040P-201ENST00000383974 107 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RNU6-1081P-201ENST00000384537 107 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 MIR217-201ENST00000384817 110 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 Y_RNA.645-201ENST00000391229 102 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RPL31P52-201ENST00000407532 367 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RNU4-26P-201ENST00000410270 107 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 Z93242.1-201ENST00000427102 353 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 ERLEC1P1-201ENST00000433806 578 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 TMSB4XP3-201ENST00000445144 114 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC105399.1-202ENST00000447303 205 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC023194.2-201ENST00000465398 406 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC010307.1-201ENST00000467206 836 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC058823.1-201ENST00000485315 474 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 HMGB1P35-201ENST00000503360 598 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 POU5F1P7-201ENST00000508759 541 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RNU6-416P-201ENST00000516265 103 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 Y_RNA.703-201ENST00000516846 111 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 IGLVIV-64-201ENST00000518581 301 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RPL7P20-201ENST00000520308 745 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 MRPS16P1-201ENST00000523462 412 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC068587.4-201ENST00000533893 186 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AP002373.2-201ENST00000541631 1060 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 NCAPGP2-201ENST00000557911 754 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AC010201.1-201ENST00000605051 540 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 RNU6-89P-201ENST00000606519 100 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 MIR8062-201ENST00000621515 85 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 AL512643.1-201ENST00000635735 524 ntBASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS3Q8IXF0 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 AC013488.1-201ENST00000526618 1838 ntBASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 AL354854.1-201ENST00000455940 1363 ntBASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 MAPK10-323ENST00000641493 3207 ntBASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NPAS3Q8IXF0 AC006020.1-201ENST00000420179 1854 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 RPL23AP57-201ENST00000332361 466 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 RNU6-472P-201ENST00000384299 107 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 RSL24D1P6-201ENST00000426934 401 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC092809.1-201ENST00000441469 474 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 DYNLT3P2-201ENST00000442517 295 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms