Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 KCTD9P2-201ENST00000512203 1013 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 SNORA48.9-201ENST00000516419 162 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 NARSP2-201ENST00000518524 679 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 OR5D15P-201ENST00000531671 942 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 RFPL1S-203ENST00000539579 330 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC023158.1-201ENST00000561632 1025 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 MIR4480-201ENST00000582492 71 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 MIR4512-201ENST00000583257 77 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC010857.1-201ENST00000606398 594 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AL049539.1-201ENST00000611964 459 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 uc_338.32-201ENST00000615087 172 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 uc_338.9-201ENST00000617424 182 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC091953.3-201ENST00000623220 236 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AP001784.1-201ENST00000624107 428 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC009452.1-201ENST00000640823 606 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 MFSD8-220ENST00000641243 1422 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AL158163.1-201ENST00000603915 1649 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 SNORD35B-201ENST00000363660 87 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 SNORA58B-201ENST00000364259 136 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 RPL31P52-201ENST00000407532 367 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 RN7SKP177-201ENST00000410567 355 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 CYP4F29P-201ENST00000420685 446 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 KCTD9P3-201ENST00000434597 1169 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 RPL35AP28-201ENST00000459730 331 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 OR52A4P-201ENST00000472867 958 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC090543.1-201ENST00000492168 485 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC093770.1-201ENST00000511559 571 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 RNU6-760P-201ENST00000516078 97 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 MTND1P6-201ENST00000523621 946 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC008083.2-201ENST00000546707 476 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC022655.2-201ENST00000577280 318 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AL133247.2-201ENST00000603236 482 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 BX322635.1-201ENST00000605804 496 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC012557.1-201ENST00000607115 611 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 Mico1.1-201ENST00000611698 204 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC100827.5-201ENST00000615883 426 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AL591424.2-201ENST00000617023 128 ntBASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUDCD3Q8IVD9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
NUDCD3Q8IVD9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
NUDCD3Q8IVD9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AL133270.1-201ENST00000402635 279 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 RPL7P53-201ENST00000421245 739 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 NPM1P24-201ENST00000428039 894 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AC006011.1-201ENST00000442758 349 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 RNU7-27P-201ENST00000459281 62 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AC092045.1-201ENST00000495716 1231 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 RPL29P14-201ENST00000495837 428 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 HMGB1P3-201ENST00000502802 616 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 KRT19P6-201ENST00000510983 209 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AC005798.1-201ENST00000513715 387 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 MIR2114-201ENST00000516645 80 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 RNU6-889P-201ENST00000517189 103 ntBASIC4.02□□□□□ -1.77
NUDCD3Q8IVD9 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms