Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RN7SKP276-201ENST00000516242 268 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 IGKV1-32-201ENST00000519290 311 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AP001880.2-201ENST00000538233 448 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 SERPINE4P-201ENST00000554978 281 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 MIR5699-201ENST00000578903 90 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC091042.1-201ENST00000579213 173 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 EIF1P6-201ENST00000600054 334 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 OR7A19P-201ENST00000608051 733 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC112503.1-201ENST00000608436 391 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 RNU6-1192P-201ENST00000612197 107 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 RNU6-489P-201ENST00000618289 107 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AL512427.1-201ENST00000618593 349 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 AC091953.3-201ENST00000623220 236 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 LINC01808-202ENST00000641680 1116 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 HSPD1P14-201ENST00000432666 1618 ntBASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP54Q7Z3B4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NUP54Q7Z3B4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AL512646.1-201ENST00000269395 1077 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 RNA5SP191-201ENST00000362585 102 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 U6.112-201ENST00000384129 70 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 SNORD65C-201ENST00000390962 71 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 RSL24D1P1-201ENST00000404972 493 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 RN7SKP100-201ENST00000411258 284 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 USP9YP9-201ENST00000429406 715 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC104651.2-201ENST00000447549 528 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC008280.2-201ENST00000455473 307 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC112206.1-201ENST00000468416 477 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 HMGB1P38-201ENST00000490557 577 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC105233.1-201ENST00000498840 781 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 SCARNA22-201ENST00000503991 125 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC026414.1-201ENST00000504046 698 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 YWHAZP1-201ENST00000556286 722 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC124068.1-201ENST00000563131 678 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC087283.1-201ENST00000604029 1074 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC099785.1-201ENST00000605697 437 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC104763.3-201ENST00000613765 618 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AC015871.5-202ENST00000623252 701 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AL445984.1-201ENST00000637834 659 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 AP001642.1-201ENST00000624727 2117 ntBASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NUP54Q7Z3B4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 ASNSP1-204ENST00000641977 1664 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC016769.2-201ENST00000414815 475 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 BX510359.2-201ENST00000417920 305 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC004690.1-201ENST00000418216 328 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms