Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL354976.1-201ENST00000613843 387 ntBASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AL365440.1-201ENST00000436135 2167 ntBASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AC093535.2-201ENST00000624769 2326 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 CBX1P3-201ENST00000413296 527 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 HMGB3P20-201ENST00000417997 600 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 RN7SKP57-201ENST00000517248 293 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AC233702.9-201ENST00000581528 203 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AC011816.2-201ENST00000607089 556 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AL512649.1-201ENST00000428997 581 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 GTF2IP8-201ENST00000560687 584 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 BNIP3P19-201ENST00000605397 577 ntBASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPAQ5VT25 NAMPTP1-201ENST00000440465 2514 ntBASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 CDY3P-201ENST00000454543 1618 ntBASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 SNORD17-201ENST00000390930 237 ntBASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 TPTE2P3-201ENST00000441562 1189 ntBASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDC42BPAQ5VT25 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 RNA5SP50-201ENST00000363731 107 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 AC017079.2-201ENST00000416102 485 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 AL391219.1-201ENST00000422570 483 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 AC097713.2-201ENST00000430199 356 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 AC025518.1-201ENST00000479856 347 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 AC010285.3-201ENST00000511668 676 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 IPO8P1-201ENST00000455509 3109 ntBASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDC42BPAQ5VT25 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 AL122016.1-201ENST00000403365 367 ntBASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 HSFY1P1-201ENST00000423928 1178 ntBASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 AC009303.3-201ENST00000591103 736 ntBASIC5.54□□□□□ -1.52
CDC42BPAQ5VT25 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms