Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SKP1P3-201ENST00000429280 487 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 BMS1P19-201ENST00000433925 393 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 HMGB1P18-201ENST00000438801 619 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 PTMAP6-201ENST00000439110 327 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC104164.1-201ENST00000460282 590 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 RN7SL72P-201ENST00000460697 269 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC022215.1-201ENST00000481770 362 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 RNU6-416P-201ENST00000516265 103 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 RNU6-835P-201ENST00000516974 104 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC107953.1-201ENST00000522216 297 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 OR5B19P-201ENST00000531766 928 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 HMGB1P42-201ENST00000532126 553 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC023050.3-201ENST00000541142 333 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 MIR4307-201ENST00000582802 84 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC010591.1-201ENST00000603941 649 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 MIR6798-201ENST00000612887 67 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AL139099.4-201ENST00000614802 114 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 AC096921.2-201ENST00000561507 1916 ntBASIC7.56□□□□□ -1.2
RC3H1Q5TC82 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.56□□□□□ -1.2
RC3H1Q5TC82 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 RAD17P2-201ENST00000451754 1977 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 LINC00622-201ENST00000562811 1570 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 RNU6-77P-201ENST00000410554 91 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC013404.1-201ENST00000413068 249 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 RPS21P8-201ENST00000413365 247 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 RPS4XP5-201ENST00000419038 768 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC133104.1-201ENST00000429100 218 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 IFNA20P-201ENST00000436840 528 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 CYCSP51-201ENST00000443545 318 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 OR13K1P-201ENST00000444577 975 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC083798.1-201ENST00000472671 131 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC090589.1-201ENST00000473109 362 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC006499.3-201ENST00000506077 748 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 IGLV3-30-201ENST00000524362 298 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AP003122.3-201ENST00000526316 255 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC080078.3-201ENST00000605407 463 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AL627309.6-201ENST00000606857 840 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AC008115.3-201ENST00000614874 549 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 MIR7155-201ENST00000615925 56 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AP003789.1-201ENST00000617737 605 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 U4.1-201ENST00000620349 87 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 AP006248.2-201ENST00000623309 592 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 RPL23AP61-201ENST00000623642 466 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 C4BPAP1-201ENST00000415474 1893 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms