Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 FAM92A1P1-201ENST00000528023 890 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AP003122.4-201ENST00000530980 758 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 ADI1P3-201ENST00000549509 470 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AC090651.1-201ENST00000567865 634 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 MIR4504-201ENST00000577413 92 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.41□□□□□ -1.54
GFRA1P56159 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.41□□□□□ -1.54
GFRA1P56159 AL139286.1-201ENST00000604465 483 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 AL445264.1-201ENST00000621719 171 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.41□□□□□ -1.54
GFRA1P56159 MTCO1P7-201ENST00000419523 1542 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 KYNUP3-201ENST00000574386 1341 ntBASIC5.41□□□□□ -1.54
GFRA1P56159 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA1P56159 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA1P56159 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.4□□□□□ -1.54
GFRA1P56159 PANDAR-201ENST00000629595 1506 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 AC130304.1-201ENST00000622942 2385 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
GFRA1P56159 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
GFRA1P56159 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA1P56159 SELENOWP1-201ENST00000322792 252 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA1P56159 Y_RNA.1-201ENST00000352915 104 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 AL024474.1-201ENST00000404655 591 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 SNRPEP6-201ENST00000407465 277 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 RNU2-8P-201ENST00000410727 190 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.4□□□□□ -1.54
GFRA1P56159 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA1P56159 MTND4P28-201ENST00000426217 387 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 CBX1P1-201ENST00000440184 427 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 SNRPEP8-201ENST00000442866 260 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.4□□□□□ -1.54
GFRA1P56159 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.4□□□□□ -1.54
GFRA1P56159 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA1P56159 AC079448.1-201ENST00000449377 373 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 AL122020.1-201ENST00000472287 459 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GFRA1P56159 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 HMGB1P36-201ENST00000487709 576 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 ARL4AP2-201ENST00000507378 601 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.4□□□□□ -1.54
GFRA1P56159 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.4□□□□□ -1.54
GFRA1P56159 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
GFRA1P56159 WBP1LP3-201ENST00000523033 208 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 AC109635.3-201ENST00000529536 185 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 AP000648.1-201ENST00000529682 397 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.4□□□□□ -1.54
GFRA1P56159 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 AL157687.1-201ENST00000554853 619 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 AC007494.1-201ENST00000562293 760 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 MIR4776-2-201ENST00000580204 80 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 RNU6-87P-201ENST00000607561 108 ntBASIC5.4□□□□□ -1.54
GFRA1P56159 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
GFRA1P56159 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.4□□□□□ -1.55
GFRA1P56159 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.4□□□□□ -1.55
GFRA1P56159 AC027088.4-201ENST00000611559 1947 ntBASIC5.4□□□□□ -1.55
GFRA1P56159 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.4□□□□□ -1.55
GFRA1P56159 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.4□□□□□ -1.55
GFRA1P56159 AC011504.1-201ENST00000623331 4103 ntBASIC5.4□□□□□ -1.55
GFRA1P56159 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
GFRA1P56159 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.4□□□□□ -1.55
GFRA1P56159 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
GFRA1P56159 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA1P56159 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 AC123769.1-201ENST00000530992 3192 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
GFRA1P56159 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms