Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 FAM35DP-201ENST00000323387 2712 ntBASIC4.01□□□□□ -1.77
PKNOX1P55347 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PKNOX1P55347 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
PKNOX1P55347 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4□□□□□ -1.77
PKNOX1P55347 RNU6-666P-201ENST00000363499 107 ntBASIC4□□□□□ -1.77
PKNOX1P55347 RN7SKP44-201ENST00000363602 316 ntBASIC4□□□□□ -1.77
PKNOX1P55347 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4□□□□□ -1.77
PKNOX1P55347 RNU6-398P-201ENST00000384143 109 ntBASIC4□□□□□ -1.77
PKNOX1P55347 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4□□□□□ -1.77
PKNOX1P55347 CCNB2P1-201ENST00000399411 1150 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4□□□□□ -1.77
PKNOX1P55347 CNOT7P1-201ENST00000429006 852 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AL356535.1-201ENST00000440335 398 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4□□□□□ -1.77
PKNOX1P55347 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4□□□□□ -1.77
PKNOX1P55347 MTND2P3-201ENST00000452458 470 ntBASIC4□□□□□ -1.77
PKNOX1P55347 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4□□□□□ -1.77
PKNOX1P55347 SUMO1P1-201ENST00000497904 306 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4□□□□□ -1.77
PKNOX1P55347 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4□□□□□ -1.77
PKNOX1P55347 HPRT1P2-201ENST00000505250 544 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AC108120.2-201ENST00000512973 294 ntBASIC4□□□□□ -1.77
PKNOX1P55347 RNU7-143P-201ENST00000516781 65 ntBASIC4□□□□□ -1.77
PKNOX1P55347 IGLVIV-53-201ENST00000520107 367 ntBASIC4□□□□□ -1.77
PKNOX1P55347 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4□□□□□ -1.77
PKNOX1P55347 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4□□□□□ -1.77
PKNOX1P55347 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4□□□□□ -1.77
PKNOX1P55347 RPL23AP87-202ENST00000573039 466 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AC022655.2-201ENST00000577280 318 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AC022884.3-201ENST00000579571 248 ntBASIC4□□□□□ -1.77
PKNOX1P55347 MIR4716-201ENST00000579628 84 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4□□□□□ -1.77
PKNOX1P55347 AC012417.1-201ENST00000582307 1039 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4□□□□□ -1.77
PKNOX1P55347 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4□□□□□ -1.77
PKNOX1P55347 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4□□□□□ -1.77
PKNOX1P55347 CR589904.2-201ENST00000612533 440 ntBASIC4□□□□□ -1.77
PKNOX1P55347 uc_338.9-201ENST00000617424 182 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AL645927.2-201ENST00000618350 349 ntBASIC4□□□□□ -1.77
PKNOX1P55347 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PKNOX1P55347 CCT8P1-201ENST00000413611 1657 ntBASIC4□□□□□ -1.77
PKNOX1P55347 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PKNOX1P55347 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4□□□□□ -1.77
PKNOX1P55347 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PKNOX1P55347 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.99□□□□□ -1.77
PKNOX1P55347 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PKNOX1P55347 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
PKNOX1P55347 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PKNOX1P55347 AC008725.1-201ENST00000605123 2263 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC103591.2-201ENST00000265259 766 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PKNOX1P55347 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PKNOX1P55347 RNA5SP447-201ENST00000363749 119 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PKNOX1P55347 MIR92A2-201ENST00000385299 75 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 RNU4-25P-201ENST00000410569 230 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 RN7SKP182-201ENST00000410772 298 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 RNA5SP498-201ENST00000411342 120 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 ELOCP19-201ENST00000411919 318 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.99□□□□□ -1.77
PKNOX1P55347 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.99□□□□□ -1.77
PKNOX1P55347 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.99□□□□□ -1.77
PKNOX1P55347 RPS27AP7-201ENST00000422792 455 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC087650.1-201ENST00000431445 468 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.99□□□□□ -1.77
PKNOX1P55347 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PKNOX1P55347 VN1R25P-201ENST00000443385 738 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.99□□□□□ -1.77
PKNOX1P55347 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.99□□□□□ -1.77
PKNOX1P55347 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.99□□□□□ -1.77
PKNOX1P55347 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.99□□□□□ -1.77
PKNOX1P55347 HMGB1P5-202ENST00000451497 985 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AL513343.1-201ENST00000451818 792 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 VN1R40P-201ENST00000455196 941 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.99□□□□□ -1.77
PKNOX1P55347 snoU13.1-201ENST00000459157 104 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AF213884.1-201ENST00000488102 463 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 RPL29P14-201ENST00000495837 428 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.99□□□□□ -1.77
PKNOX1P55347 AC093720.1-201ENST00000505681 714 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 MTCO1P31-201ENST00000506355 492 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC093824.1-201ENST00000508796 343 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC099522.1-202ENST00000514718 367 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 RNU6-1004P-201ENST00000516584 111 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 RNA5SP143-201ENST00000516936 115 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PKNOX1P55347 HMGB1P46-201ENST00000520062 610 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC026616.1-201ENST00000523157 525 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms