Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SCARNA16.4-201ENST00000516956 187 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AF186190.1-201ENST00000517470 480 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 ARL2BPP5-201ENST00000523141 481 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 HMGN2P6-201ENST00000551091 273 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC093519.1-201ENST00000566109 298 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 CYCSP40-201ENST00000575927 294 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC234772.3-201ENST00000602277 528 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AL354760.1-201ENST00000608357 643 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC009237.15-201ENST00000610252 501 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.78□□□□□ -1.64
NR1H2P55055 RNU6-156P-201ENST00000621869 107 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.78□□□□□ -1.64
NR1H2P55055 AC000123.2-201ENST00000623124 461 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR1H2P55055 DHX9P1-201ENST00000436565 3076 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.78□□□□□ -1.64
NR1H2P55055 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 SEPT7P7-201ENST00000420492 1301 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AL355578.1-201ENST00000607405 1328 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NR1H2P55055 AL672167.1-205ENST00000641112 3080 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NR1H2P55055 RNA5SP28-201ENST00000363841 119 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 SNORD116-12-201ENST00000384468 92 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 RPS24P12-201ENST00000402084 394 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AL592291.1-201ENST00000403830 352 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 RN7SKP213-201ENST00000410746 298 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AL390774.1-201ENST00000411924 246 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 RPL21P108-201ENST00000413857 481 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.77□□□□□ -1.65
NR1H2P55055 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 AC007559.1-201ENST00000428736 355 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 MTCO1P54-201ENST00000430139 712 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.77□□□□□ -1.65
NR1H2P55055 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.77□□□□□ -1.65
NR1H2P55055 VN1R25P-201ENST00000443385 738 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 MRPL48P1-201ENST00000445390 636 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC112492.1-201ENST00000449607 712 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.77□□□□□ -1.65
NR1H2P55055 PNPLA4P1-201ENST00000458328 305 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 SNORD11.1-201ENST00000459482 85 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 RPL7AP6-201ENST00000477943 801 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.77□□□□□ -1.65
NR1H2P55055 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.77□□□□□ -1.65
NR1H2P55055 HMGB1P44-201ENST00000508597 572 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.77□□□□□ -1.65
NR1H2P55055 RN7SKP287-201ENST00000516546 266 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC092747.2-201ENST00000545069 983 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 GSTP1P1-201ENST00000548078 319 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 BLZF2P-201ENST00000553776 1130 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 RPL21P7-201ENST00000557463 483 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.77□□□□□ -1.65
NR1H2P55055 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.77□□□□□ -1.65
NR1H2P55055 RN7SL708P-201ENST00000580952 299 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC009597.2-201ENST00000604659 592 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AL162431.4-201ENST00000604674 411 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC093424.1-201ENST00000604999 338 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 AC009159.2-201ENST00000617603 606 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NR1H2P55055 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 MFSD8-220ENST00000641243 1422 ntBASIC4.77□□□□□ -1.65
NR1H2P55055 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NR1H2P55055 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NR1H2P55055 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NR1H2P55055 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.76□□□□□ -1.65
NR1H2P55055 AC090229.1-201ENST00000590983 1609 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 RNU6-1066P-201ENST00000363573 105 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 RNA5SP339-201ENST00000390987 122 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC136624.1-201ENST00000400791 413 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms