Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 NRBF2P4-201ENST00000520874 850 ntBASIC6.43□□□□□ -1.38
USP11P51784 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.43□□□□□ -1.38
USP11P51784 FAM92A1P1-201ENST00000528023 890 ntBASIC6.43□□□□□ -1.38
USP11P51784 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 AC137627.1-201ENST00000545761 289 ntBASIC6.43□□□□□ -1.38
USP11P51784 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.43□□□□□ -1.38
USP11P51784 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.43□□□□□ -1.38
USP11P51784 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 AL133457.1-201ENST00000564251 987 ntBASIC6.43□□□□□ -1.38
USP11P51784 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.43□□□□□ -1.38
USP11P51784 MEMO1P5-201ENST00000604810 406 ntBASIC6.43□□□□□ -1.38
USP11P51784 AL009028.1-201ENST00000604895 802 ntBASIC6.43□□□□□ -1.38
USP11P51784 STMN1P1-201ENST00000617809 440 ntBASIC6.43□□□□□ -1.38
USP11P51784 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USP11P51784 DDX18P6-201ENST00000450119 1997 ntBASIC6.43□□□□□ -1.38
USP11P51784 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
USP11P51784 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.43□□□□□ -1.38
USP11P51784 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 AC011447.7-201ENST00000624228 1590 ntBASIC6.43□□□□□ -1.38
USP11P51784 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.43□□□□□ -1.38
USP11P51784 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.43□□□□□ -1.38
USP11P51784 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
USP11P51784 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 AC020633.1-201ENST00000468439 2247 ntBASIC6.42□□□□□ -1.38
USP11P51784 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.42□□□□□ -1.38
USP11P51784 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
USP11P51784 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.42□□□□□ -1.38
USP11P51784 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.42□□□□□ -1.38
USP11P51784 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USP11P51784 RNU5D-1-201ENST00000363299 116 ntBASIC6.42□□□□□ -1.38
USP11P51784 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USP11P51784 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 RPS6P23-201ENST00000413224 722 ntBASIC6.42□□□□□ -1.38
USP11P51784 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.42□□□□□ -1.38
USP11P51784 AL389915.1-201ENST00000422463 466 ntBASIC6.42□□□□□ -1.38
USP11P51784 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.42□□□□□ -1.38
USP11P51784 UBE2FP3-201ENST00000436366 524 ntBASIC6.42□□□□□ -1.38
USP11P51784 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.42□□□□□ -1.38
USP11P51784 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.42□□□□□ -1.38
USP11P51784 HMGN2P25-201ENST00000486956 268 ntBASIC6.42□□□□□ -1.38
USP11P51784 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.42□□□□□ -1.38
USP11P51784 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.42□□□□□ -1.38
USP11P51784 CDH12P2-201ENST00000504393 298 ntBASIC6.42□□□□□ -1.38
USP11P51784 AC109481.1-201ENST00000509173 282 ntBASIC6.42□□□□□ -1.38
USP11P51784 AC011411.1-201ENST00000509592 876 ntBASIC6.42□□□□□ -1.38
USP11P51784 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.42□□□□□ -1.38
USP11P51784 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.42□□□□□ -1.38
USP11P51784 Y_RNA.675-201ENST00000516389 149 ntBASIC6.42□□□□□ -1.38
USP11P51784 PAICSP4-201ENST00000517543 1253 ntBASIC6.42□□□□□ -1.38
USP11P51784 OR5M7P-201ENST00000526140 972 ntBASIC6.42□□□□□ -1.38
USP11P51784 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.42□□□□□ -1.38
USP11P51784 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.42□□□□□ -1.38
USP11P51784 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.42□□□□□ -1.38
USP11P51784 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.42□□□□□ -1.38
USP11P51784 AL049872.1-201ENST00000556323 322 ntBASIC6.42□□□□□ -1.38
USP11P51784 GTF2IP8-201ENST00000560687 584 ntBASIC6.42□□□□□ -1.38
USP11P51784 HMGB1P33-201ENST00000563485 527 ntBASIC6.42□□□□□ -1.38
USP11P51784 MIR4795-201ENST00000584182 89 ntBASIC6.42□□□□□ -1.38
USP11P51784 AC008115.3-201ENST00000614874 549 ntBASIC6.42□□□□□ -1.38
USP11P51784 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.42□□□□□ -1.38
USP11P51784 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.42□□□□□ -1.38
USP11P51784 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.42□□□□□ -1.38
USP11P51784 AC068870.3-201ENST00000625077 2536 ntBASIC6.42□□□□□ -1.38
USP11P51784 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
USP11P51784 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 AC025470.1-201ENST00000510053 2032 ntBASIC6.42□□□□□ -1.38
USP11P51784 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP11P51784 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 GAPDHP24-201ENST00000328713 983 ntBASIC6.41□□□□□ -1.38
USP11P51784 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 Y_RNA.279-201ENST00000364763 95 ntBASIC6.41□□□□□ -1.38
USP11P51784 Y_RNA.573-201ENST00000384763 105 ntBASIC6.41□□□□□ -1.38
USP11P51784 AL356776.1-201ENST00000406574 447 ntBASIC6.41□□□□□ -1.38
USP11P51784 MIR1302-11-201ENST00000408051 138 ntBASIC6.41□□□□□ -1.38
USP11P51784 MIR1302-9-201ENST00000408365 138 ntBASIC6.41□□□□□ -1.38
USP11P51784 MIR1302-10-201ENST00000408734 138 ntBASIC6.41□□□□□ -1.38
USP11P51784 RN7SKP286-201ENST00000410894 299 ntBASIC6.41□□□□□ -1.38
USP11P51784 RN7SKP17-201ENST00000411242 351 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms