Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.59□□□□□ -1.35
SMARCA4P51532 AC010680.3-201ENST00000604215 520 ntBASIC6.59□□□□□ -1.35
SMARCA4P51532 AL390816.3-201ENST00000604527 1066 ntBASIC6.59□□□□□ -1.35
SMARCA4P51532 ATE1-AS1-202ENST00000636460 506 ntBASIC6.59□□□□□ -1.35
SMARCA4P51532 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SMARCA4P51532 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.59□□□□□ -1.35
SMARCA4P51532 UBE3AP2-201ENST00000429033 2259 ntBASIC6.59□□□□□ -1.35
SMARCA4P51532 AC120036.2-201ENST00000509729 1474 ntBASIC6.59□□□□□ -1.36
SMARCA4P51532 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SMARCA4P51532 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.58□□□□□ -1.36
SMARCA4P51532 AL133383.2-201ENST00000622958 2336 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMARCA4P51532 AL031121.1-201ENST00000406553 254 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 AC025518.1-201ENST00000479856 347 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC6.58□□□□□ -1.36
SMARCA4P51532 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.58□□□□□ -1.36
SMARCA4P51532 MIR3936-201ENST00000584304 110 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
SMARCA4P51532 AP000255.1-201ENST00000610276 676 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 AL354976.1-201ENST00000613843 387 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SMARCA4P51532 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMARCA4P51532 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMARCA4P51532 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMARCA4P51532 AL442128.2-201ENST00000620246 1824 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 MAPK10-303ENST00000641324 3959 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 RNA5SP374-201ENST00000362939 125 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 Y_RNA.510-201ENST00000384511 114 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.58□□□□□ -1.36
SMARCA4P51532 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SMARCA4P51532 AC005008.1-201ENST00000456151 612 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 AC008481.1-201ENST00000463278 396 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 PPP1R11P1-201ENST00000486095 376 ntBASIC6.58□□□□□ -1.36
SMARCA4P51532 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.58□□□□□ -1.36
SMARCA4P51532 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.58□□□□□ -1.36
SMARCA4P51532 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMARCA4P51532 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMARCA4P51532 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SMARCA4P51532 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.57□□□□□ -1.36
SMARCA4P51532 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SMARCA4P51532 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SMARCA4P51532 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SMARCA4P51532 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SMARCA4P51532 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.57□□□□□ -1.36
SMARCA4P51532 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.57□□□□□ -1.36
SMARCA4P51532 MTND6P5-201ENST00000448266 512 ntBASIC6.57□□□□□ -1.36
SMARCA4P51532 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.57□□□□□ -1.36
SMARCA4P51532 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.57□□□□□ -1.36
SMARCA4P51532 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC6.57□□□□□ -1.36
SMARCA4P51532 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SMARCA4P51532 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SMARCA4P51532 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SMARCA4P51532 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SMARCA4P51532 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.56□□□□□ -1.36
SMARCA4P51532 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SMARCA4P51532 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.56□□□□□ -1.36
SMARCA4P51532 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SMARCA4P51532 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
SMARCA4P51532 BMS1P3-201ENST00000372011 932 ntBASIC6.56□□□□□ -1.36
SMARCA4P51532 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SMARCA4P51532 AJ239321.1-201ENST00000424255 564 ntBASIC6.56□□□□□ -1.36
SMARCA4P51532 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.56□□□□□ -1.36
SMARCA4P51532 RPL32P34-201ENST00000486380 400 ntBASIC6.56□□□□□ -1.36
SMARCA4P51532 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.56□□□□□ -1.36
SMARCA4P51532 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.56□□□□□ -1.36
SMARCA4P51532 MTCO1P46-201ENST00000451639 1491 ntBASIC6.56□□□□□ -1.36
SMARCA4P51532 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SMARCA4P51532 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC6.56□□□□□ -1.36
SMARCA4P51532 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SMARCA4P51532 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SMARCA4P51532 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.55□□□□□ -1.36
SMARCA4P51532 VN1R25P-201ENST00000443385 738 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 RPS15AP29-201ENST00000445539 400 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 RPL26P28-201ENST00000451325 435 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 VN1R40P-201ENST00000455196 941 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 RNA5SP103-201ENST00000459503 118 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 RPL21P13-201ENST00000488305 481 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 PRELID3BP6-201ENST00000503839 571 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.55□□□□□ -1.36
SMARCA4P51532 EIF4BP1-201ENST00000554881 351 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.55□□□□□ -1.36
SMARCA4P51532 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.55□□□□□ -1.36
SMARCA4P51532 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 AC069209.1-201ENST00000619282 651 ntBASIC6.55□□□□□ -1.36
SMARCA4P51532 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.55□□□□□ -1.36
SMARCA4P51532 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.55□□□□□ -1.36
SMARCA4P51532 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SMARCA4P51532 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SMARCA4P51532 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.54□□□□□ -1.36
SMARCA4P51532 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SMARCA4P51532 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms