Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.76□□□□□ -1.65
HADHAP40939 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.76□□□□□ -1.65
HADHAP40939 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HADHAP40939 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.76□□□□□ -1.65
HADHAP40939 CR383656.6-201ENST00000550518 394 ntBASIC4.76□□□□□ -1.65
HADHAP40939 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.76□□□□□ -1.65
HADHAP40939 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.76□□□□□ -1.65
HADHAP40939 ATP5J2P6-201ENST00000565203 266 ntBASIC4.76□□□□□ -1.65
HADHAP40939 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.76□□□□□ -1.65
HADHAP40939 MIR3667-201ENST00000581025 74 ntBASIC4.76□□□□□ -1.65
HADHAP40939 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.76□□□□□ -1.65
HADHAP40939 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.76□□□□□ -1.65
HADHAP40939 MIR6748-201ENST00000610433 71 ntBASIC4.76□□□□□ -1.65
HADHAP40939 AC087385.3-201ENST00000620477 187 ntBASIC4.76□□□□□ -1.65
HADHAP40939 AL121594.5-201ENST00000631724 573 ntBASIC4.76□□□□□ -1.65
HADHAP40939 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.76□□□□□ -1.65
HADHAP40939 AL445984.1-201ENST00000637834 659 ntBASIC4.76□□□□□ -1.65
HADHAP40939 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.76□□□□□ -1.65
HADHAP40939 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HADHAP40939 AC027290.2-201ENST00000623210 18662 ntBASIC4.76□□□□□ -1.65
HADHAP40939 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
HADHAP40939 XPOTP1-201ENST00000443317 2398 ntBASIC4.76□□□□□ -1.65
HADHAP40939 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HADHAP40939 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
HADHAP40939 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.75□□□□□ -1.65
HADHAP40939 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HADHAP40939 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HADHAP40939 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.75□□□□□ -1.65
HADHAP40939 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.75□□□□□ -1.65
HADHAP40939 AL592182.3-201ENST00000642132 3304 ntBASIC4.75□□□□□ -1.65
HADHAP40939 ATP5F1P2-201ENST00000398143 760 ntBASIC4.75□□□□□ -1.65
HADHAP40939 RNA5SP113-201ENST00000410486 84 ntBASIC4.75□□□□□ -1.65
HADHAP40939 RPL7P57-201ENST00000423238 740 ntBASIC4.75□□□□□ -1.65
HADHAP40939 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.75□□□□□ -1.65
HADHAP40939 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 HMGB1P48-201ENST00000446155 598 ntBASIC4.75□□□□□ -1.65
HADHAP40939 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 AC010733.1-201ENST00000451515 401 ntBASIC4.75□□□□□ -1.65
HADHAP40939 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.75□□□□□ -1.65
HADHAP40939 MTATP6P14-201ENST00000455189 673 ntBASIC4.75□□□□□ -1.65
HADHAP40939 RNU7-140P-201ENST00000459546 60 ntBASIC4.75□□□□□ -1.65
HADHAP40939 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 AC108022.1-201ENST00000493466 478 ntBASIC4.75□□□□□ -1.65
HADHAP40939 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 RN7SKP82-201ENST00000516786 223 ntBASIC4.75□□□□□ -1.65
HADHAP40939 SCARNA1-201ENST00000517138 166 ntBASIC4.75□□□□□ -1.65
HADHAP40939 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 IGKV1-32-201ENST00000519290 311 ntBASIC4.75□□□□□ -1.65
HADHAP40939 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HADHAP40939 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.75□□□□□ -1.65
HADHAP40939 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 DEFB109D-201ENST00000529497 240 ntBASIC4.75□□□□□ -1.65
HADHAP40939 AC118942.1-201ENST00000529674 1035 ntBASIC4.75□□□□□ -1.65
HADHAP40939 CYCSP28-201ENST00000534284 321 ntBASIC4.75□□□□□ -1.65
HADHAP40939 SERPINE4P-201ENST00000554978 281 ntBASIC4.75□□□□□ -1.65
HADHAP40939 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 MIR4737-201ENST00000583979 81 ntBASIC4.75□□□□□ -1.65
HADHAP40939 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.75□□□□□ -1.65
HADHAP40939 AP003117.1-201ENST00000602771 554 ntBASIC4.75□□□□□ -1.65
HADHAP40939 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.75□□□□□ -1.65
HADHAP40939 AL512782.1-201ENST00000603093 364 ntBASIC4.75□□□□□ -1.65
HADHAP40939 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.75□□□□□ -1.65
HADHAP40939 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HADHAP40939 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HADHAP40939 AC109454.4-201ENST00000623411 649 ntBASIC4.75□□□□□ -1.65
HADHAP40939 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.75□□□□□ -1.65
HADHAP40939 AL356118.1-201ENST00000635272 1078 ntBASIC4.75□□□□□ -1.65
HADHAP40939 MIR6715B-201ENST00000637172 77 ntBASIC4.75□□□□□ -1.65
HADHAP40939 BX649567.1-201ENST00000642071 1134 ntBASIC4.75□□□□□ -1.65
HADHAP40939 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HADHAP40939 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HADHAP40939 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HADHAP40939 AL442639.1-201ENST00000625030 1899 ntBASIC4.75□□□□□ -1.65
HADHAP40939 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HADHAP40939 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.74□□□□□ -1.65
HADHAP40939 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HADHAP40939 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HADHAP40939 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.74□□□□□ -1.65
HADHAP40939 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.74□□□□□ -1.65
HADHAP40939 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.74□□□□□ -1.65
HADHAP40939 RNU6-353P-201ENST00000364266 108 ntBASIC4.74□□□□□ -1.65
HADHAP40939 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 RNU6-1279P-201ENST00000383917 103 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AL590762.2-201ENST00000395798 571 ntBASIC4.74□□□□□ -1.65
HADHAP40939 RN7SKP216-201ENST00000411050 312 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC092638.1-201ENST00000411966 1275 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC009237.10-201ENST00000414112 510 ntBASIC4.74□□□□□ -1.65
HADHAP40939 CYCSP10-201ENST00000417973 294 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AC004690.1-201ENST00000418216 328 ntBASIC4.74□□□□□ -1.65
HADHAP40939 TCEA1P2-201ENST00000420496 906 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AL645608.4-201ENST00000423619 154 ntBASIC4.74□□□□□ -1.65
HADHAP40939 AL009174.1-201ENST00000426577 416 ntBASIC4.74□□□□□ -1.65
HADHAP40939 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.74□□□□□ -1.65
HADHAP40939 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.74□□□□□ -1.65
HADHAP40939 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms