Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RNU6-398P-201ENST00000384143 109 ntBASIC5.67□□□□□ -1.5
LTBRP36941 RNU6-297P-201ENST00000384636 107 ntBASIC5.67□□□□□ -1.5
LTBRP36941 MIR506-201ENST00000384998 124 ntBASIC5.67□□□□□ -1.5
LTBRP36941 RPS24P12-201ENST00000402084 394 ntBASIC5.67□□□□□ -1.5
LTBRP36941 RPS4XP9-201ENST00000405151 780 ntBASIC5.67□□□□□ -1.5
LTBRP36941 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBRP36941 HMGB3P23-201ENST00000414981 585 ntBASIC5.67□□□□□ -1.5
LTBRP36941 COX6B1P1-201ENST00000415962 213 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.67□□□□□ -1.5
LTBRP36941 MTND3P21-201ENST00000433774 331 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC122718.1-201ENST00000439448 744 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AL022238.1-201ENST00000442557 355 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC244505.5-201ENST00000443639 207 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBRP36941 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 AC003071.1-201ENST00000451219 789 ntBASIC5.67□□□□□ -1.5
LTBRP36941 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 SNRPFP4-201ENST00000456366 242 ntBASIC5.67□□□□□ -1.5
LTBRP36941 FAM133DP-201ENST00000464802 691 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC013828.1-201ENST00000481845 158 ntBASIC5.67□□□□□ -1.5
LTBRP36941 RPL9P6-201ENST00000492764 598 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 AF131216.2-201ENST00000512316 564 ntBASIC5.67□□□□□ -1.5
LTBRP36941 OR7H2P-201ENST00000513483 306 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBRP36941 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.67□□□□□ -1.5
LTBRP36941 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBRP36941 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBRP36941 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 AP005403.1-201ENST00000579720 229 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBRP36941 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 AC067852.5-201ENST00000589299 310 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC011487.3-201ENST00000593607 453 ntBASIC5.67□□□□□ -1.5
LTBRP36941 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBRP36941 AC011497.2-201ENST00000600255 639 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AL159169.3-201ENST00000608871 561 ntBASIC5.67□□□□□ -1.5
LTBRP36941 EIF3FP1-201ENST00000613970 806 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC083809.1-201ENST00000615051 472 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LTBRP36941 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBRP36941 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBRP36941 ELF2P3-201ENST00000445099 1506 ntBASIC5.67□□□□□ -1.5
LTBRP36941 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBRP36941 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.67□□□□□ -1.5
LTBRP36941 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBRP36941 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBRP36941 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 AC090017.1-201ENST00000548612 1779 ntBASIC5.67□□□□□ -1.5
LTBRP36941 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBRP36941 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBRP36941 THAP12P4-201ENST00000528321 2266 ntBASIC5.67□□□□□ -1.5
LTBRP36941 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
LTBRP36941 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LTBRP36941 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
LTBRP36941 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LTBRP36941 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBRP36941 DOCK11P1-201ENST00000553480 5932 ntBASIC5.66□□□□□ -1.5
LTBRP36941 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBRP36941 RBPJP2-201ENST00000618187 1444 ntBASIC5.66□□□□□ -1.5
LTBRP36941 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBRP36941 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 CR848007.1-201ENST00000442354 1699 ntBASIC5.66□□□□□ -1.5
LTBRP36941 AC025125.1-201ENST00000624743 1922 ntBASIC5.66□□□□□ -1.5
LTBRP36941 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 MSL3P1-202ENST00000440028 1468 ntBASIC5.66□□□□□ -1.5
LTBRP36941 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBRP36941 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LTBRP36941 SNORA62-201ENST00000365493 153 ntBASIC5.66□□□□□ -1.5
LTBRP36941 Y_RNA.554-201ENST00000384672 102 ntBASIC5.66□□□□□ -1.5
LTBRP36941 RNA5SP91-201ENST00000390902 119 ntBASIC5.66□□□□□ -1.5
LTBRP36941 RPL17P50-201ENST00000396131 546 ntBASIC5.66□□□□□ -1.5
LTBRP36941 GJA6P-201ENST00000415117 1042 ntBASIC5.66□□□□□ -1.5
LTBRP36941 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.66□□□□□ -1.5
LTBRP36941 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBRP36941 USP9YP13-201ENST00000417797 480 ntBASIC5.66□□□□□ -1.5
LTBRP36941 AIMP1P1-201ENST00000418670 937 ntBASIC5.66□□□□□ -1.5
LTBRP36941 OR2AM1P-201ENST00000422137 422 ntBASIC5.66□□□□□ -1.5
LTBRP36941 AC007568.1-201ENST00000422912 471 ntBASIC5.66□□□□□ -1.5
LTBRP36941 USP9YP18-201ENST00000425912 695 ntBASIC5.66□□□□□ -1.5
LTBRP36941 MTCO3P21-201ENST00000430791 643 ntBASIC5.66□□□□□ -1.5
LTBRP36941 MTND4P25-201ENST00000441039 533 ntBASIC5.66□□□□□ -1.5
LTBRP36941 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.66□□□□□ -1.5
LTBRP36941 GAPDHP25-201ENST00000447061 1001 ntBASIC5.66□□□□□ -1.5
LTBRP36941 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBRP36941 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.66□□□□□ -1.5
LTBRP36941 AC098824.1-201ENST00000453565 980 ntBASIC5.66□□□□□ -1.5
LTBRP36941 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.66□□□□□ -1.5
LTBRP36941 Z92846.1-201ENST00000456203 268 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms