Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC244505.7-201ENST00000599675 272 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 AC005972.3-201ENST00000606304 481 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 AC083899.2-201ENST00000423285 1376 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
COL5A1P20908 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
COL5A1P20908 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.74□□□□□ -1.81
COL5A1P20908 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.74□□□□□ -1.81
COL5A1P20908 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 AC010740.1-201ENST00000417035 684 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 AL590609.2-201ENST00000421430 368 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.74□□□□□ -1.81
COL5A1P20908 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.74□□□□□ -1.81
COL5A1P20908 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.74□□□□□ -1.81
COL5A1P20908 AP001486.1-201ENST00000463339 476 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 NPM1P29-201ENST00000483112 803 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 AC025445.1-201ENST00000502728 300 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 STMN1P2-201ENST00000508435 439 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 HMGN1P11-201ENST00000508668 303 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.74□□□□□ -1.81
COL5A1P20908 MTND1P6-201ENST00000523621 946 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.74□□□□□ -1.81
COL5A1P20908 AC007599.1-201ENST00000568688 1174 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 AC116312.1-201ENST00000606841 314 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 AL354760.1-201ENST00000608357 643 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 MIR8058-201ENST00000615737 89 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.74□□□□□ -1.81
COL5A1P20908 AC243312.2-201ENST00000623340 601 ntBASIC3.74□□□□□ -1.81
COL5A1P20908 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.74□□□□□ -1.81
COL5A1P20908 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.74□□□□□ -1.81
COL5A1P20908 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
COL5A1P20908 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL5A1P20908 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL5A1P20908 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.73□□□□□ -1.81
COL5A1P20908 HLA-N-201ENST00000437516 135 ntBASIC3.73□□□□□ -1.81
COL5A1P20908 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.73□□□□□ -1.81
COL5A1P20908 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.73□□□□□ -1.81
COL5A1P20908 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.73□□□□□ -1.81
COL5A1P20908 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.73□□□□□ -1.81
COL5A1P20908 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.73□□□□□ -1.81
COL5A1P20908 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.73□□□□□ -1.81
COL5A1P20908 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.73□□□□□ -1.81
COL5A1P20908 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 AC026368.1-201ENST00000614934 690 ntBASIC3.73□□□□□ -1.81
COL5A1P20908 PRO1804-201ENST00000623780 2050 ntBASIC3.73□□□□□ -1.81
COL5A1P20908 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.73□□□□□ -1.81
COL5A1P20908 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL5A1P20908 OR51C1P-202ENST00000641159 1444 ntBASIC3.73□□□□□ -1.81
COL5A1P20908 MUC2-202ENST00000613187 4845 ntBASIC3.73□□□□□ -1.81
COL5A1P20908 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.72□□□□□ -1.81
COL5A1P20908 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COL5A1P20908 MIR1251-201ENST00000408552 70 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 ATP5A1P2-201ENST00000412323 255 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 SETP15-201ENST00000412724 337 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 MTND2P15-201ENST00000418575 892 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.72□□□□□ -1.81
COL5A1P20908 SEPT14P1-201ENST00000458703 648 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL5A1P20908 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.72□□□□□ -1.81
COL5A1P20908 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.72□□□□□ -1.81
COL5A1P20908 RN7SKP57-201ENST00000517248 293 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.72□□□□□ -1.81
COL5A1P20908 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.72□□□□□ -1.81
COL5A1P20908 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.72□□□□□ -1.81
COL5A1P20908 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.72□□□□□ -1.81
COL5A1P20908 OR7A8P-201ENST00000595427 913 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 AC092354.2-201ENST00000607786 514 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 AL591424.2-201ENST00000617023 128 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL5A1P20908 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL5A1P20908 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COL5A1P20908 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL5A1P20908 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.72□□□□□ -1.81
COL5A1P20908 MIR490-201ENST00000384865 128 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 SNORA48.2-201ENST00000390926 124 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 VN1R51P-201ENST00000411675 945 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 CYCSP4-201ENST00000429682 331 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 ELOCP8-201ENST00000439309 332 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 ELOCP15-201ENST00000442090 332 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 RPL21P11-201ENST00000461458 483 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 RPS4XP10-201ENST00000465034 731 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 RPL21P6-201ENST00000479171 504 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 AC139783.2-201ENST00000504847 1145 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.72□□□□□ -1.81
COL5A1P20908 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.72□□□□□ -1.81
COL5A1P20908 AC079171.1-201ENST00000568788 914 ntBASIC3.72□□□□□ -1.81
COL5A1P20908 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.72□□□□□ -1.81
COL5A1P20908 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.72□□□□□ -1.81
COL5A1P20908 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms