Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 AC009951.1-201ENST00000623674 2614 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFRAP16234 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 AC092162.3-201ENST00000624511 1624 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDGFRAP16234 MIR3065-201ENST00000390137 79 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 HMGB3P18-201ENST00000406327 590 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 SNORA74C-2-201ENST00000411179 201 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFRAP16234 MTCO1P43-201ENST00000431831 488 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFRAP16234 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFRAP16234 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFRAP16234 TPTE2P6-202ENST00000445572 1007 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 EEF1A1P1-201ENST00000447052 739 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 NDUFS5P3-201ENST00000450668 321 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 Z95152.1-201ENST00000453556 656 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFRAP16234 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
PDGFRAP16234 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFRAP16234 HMGB3P13-201ENST00000511263 607 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 TCP11X3P-202ENST00000514289 1254 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFRAP16234 AP000916.1-201ENST00000533869 835 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 AC015911.5-201ENST00000587076 451 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 AC012254.4-201ENST00000588843 273 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFRAP16234 AL356218.2-201ENST00000605264 187 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 AC026979.4-201ENST00000606555 645 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 AC245100.7-201ENST00000609678 442 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 MIR6758-201ENST00000620653 63 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFRAP16234 AP003072.4-201ENST00000624580 310 ntBASIC4.62□□□□□ -1.67
PDGFRAP16234 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
PDGFRAP16234 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFRAP16234 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFRAP16234 AC022031.1-201ENST00000585985 2593 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFRAP16234 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFRAP16234 USP9YP4-201ENST00000424401 1745 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFRAP16234 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDGFRAP16234 IL6STP1-201ENST00000346911 1020 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 RNU6-543P-201ENST00000362576 108 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 HDGFP1-201ENST00000405943 252 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 TMSB10P2-201ENST00000416049 131 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC008173.1-201ENST00000418901 264 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 UBE2V1P6-201ENST00000430840 422 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 RPEP2-201ENST00000432149 701 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 AC114495.1-201ENST00000441274 436 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFRAP16234 RPL7P31-201ENST00000450192 724 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 HMGB3P21-201ENST00000452483 547 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 RPL37P3-201ENST00000456825 293 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 S100A11P1-201ENST00000477525 312 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC112518.2-201ENST00000508565 425 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 ATP1B1P1-201ENST00000509767 915 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC021146.3-201ENST00000511911 260 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC015795.1-201ENST00000513669 327 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.61□□□□□ -1.67
PDGFRAP16234 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFRAP16234 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.61□□□□□ -1.67
PDGFRAP16234 RPL23AP97-201ENST00000568955 471 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC125494.3-201ENST00000602759 455 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC079587.1-201ENST00000603846 277 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AC092574.1-201ENST00000609771 420 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 AL138721.1-201ENST00000616756 179 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 STMN1P1-201ENST00000617809 440 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFRAP16234 AC010300.1-201ENST00000600671 5134 ntBASIC4.61□□□□□ -1.67
PDGFRAP16234 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.61□□□□□ -1.67
PDGFRAP16234 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PDGFRAP16234 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFRAP16234 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
PDGFRAP16234 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PDGFRAP16234 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PDGFRAP16234 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PDGFRAP16234 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFRAP16234 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFRAP16234 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PDGFRAP16234 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFRAP16234 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFRAP16234 RNA5SP27-201ENST00000363839 119 ntBASIC4.6□□□□□ -1.67
PDGFRAP16234 RPL23AP59-201ENST00000399415 461 ntBASIC4.6□□□□□ -1.67
PDGFRAP16234 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFRAP16234 P2RY10P2-201ENST00000416730 913 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms