Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CD28P10747 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD28P10747 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CD28P10747 RNU1-85P-201ENST00000364127 164 ntBASIC3.26□□□□□ -1.89
CD28P10747 RNU6-31P-201ENST00000384388 108 ntBASIC3.26□□□□□ -1.89
CD28P10747 MIR554-201ENST00000384874 96 ntBASIC3.26□□□□□ -1.89
CD28P10747 SNORD66.1-201ENST00000391230 76 ntBASIC3.26□□□□□ -1.89
CD28P10747 GSTA12P-201ENST00000402398 508 ntBASIC3.26□□□□□ -1.89
CD28P10747 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.26□□□□□ -1.89
CD28P10747 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.26□□□□□ -1.89
CD28P10747 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.26□□□□□ -1.89
CD28P10747 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.26□□□□□ -1.89
CD28P10747 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.26□□□□□ -1.89
CD28P10747 AL445528.1-201ENST00000426330 420 ntBASIC3.26□□□□□ -1.89
CD28P10747 DYNLL1P7-201ENST00000429273 258 ntBASIC3.26□□□□□ -1.89
CD28P10747 BMS1P19-201ENST00000433925 393 ntBASIC3.26□□□□□ -1.89
CD28P10747 AL353597.2-202ENST00000434901 373 ntBASIC3.26□□□□□ -1.89
CD28P10747 AC069285.2-201ENST00000440210 275 ntBASIC3.26□□□□□ -1.89
CD28P10747 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.26□□□□□ -1.89
CD28P10747 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.26□□□□□ -1.89
CD28P10747 RPS27AP15-201ENST00000447672 466 ntBASIC3.26□□□□□ -1.89
CD28P10747 AL627224.1-201ENST00000448334 444 ntBASIC3.26□□□□□ -1.89
CD28P10747 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.26□□□□□ -1.89
CD28P10747 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.26□□□□□ -1.89
CD28P10747 AC021205.1-201ENST00000468797 348 ntBASIC3.26□□□□□ -1.89
CD28P10747 METTL15P1-201ENST00000481421 1045 ntBASIC3.26□□□□□ -1.89
CD28P10747 VN1R105P-201ENST00000486595 910 ntBASIC3.26□□□□□ -1.89
CD28P10747 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.26□□□□□ -1.89
CD28P10747 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.26□□□□□ -1.89
CD28P10747 AC010460.1-201ENST00000507087 466 ntBASIC3.26□□□□□ -1.89
CD28P10747 AC108120.2-201ENST00000512973 294 ntBASIC3.26□□□□□ -1.89
CD28P10747 NDUFB4P12-201ENST00000513465 390 ntBASIC3.26□□□□□ -1.89
CD28P10747 AC016550.3-201ENST00000515706 767 ntBASIC3.26□□□□□ -1.89
CD28P10747 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.26□□□□□ -1.89
CD28P10747 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.26□□□□□ -1.89
CD28P10747 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.26□□□□□ -1.89
CD28P10747 AC018552.3-201ENST00000567416 561 ntBASIC3.26□□□□□ -1.89
CD28P10747 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.26□□□□□ -1.89
CD28P10747 AC053481.4-201ENST00000583164 216 ntBASIC3.26□□□□□ -1.89
CD28P10747 RPL7P50-201ENST00000600588 727 ntBASIC3.26□□□□□ -1.89
CD28P10747 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.26□□□□□ -1.89
CD28P10747 AL158196.1-201ENST00000616786 434 ntBASIC3.26□□□□□ -1.89
CD28P10747 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD28P10747 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.26□□□□□ -1.89
CD28P10747 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.26□□□□□ -1.89
CD28P10747 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CD28P10747 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD28P10747 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD28P10747 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CD28P10747 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CD28P10747 FAM91A3P-201ENST00000456826 2544 ntBASIC3.25□□□□□ -1.89
CD28P10747 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.25□□□□□ -1.89
CD28P10747 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 AC074029.4-201ENST00000624796 1859 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC011155.1-201ENST00000316512 456 ntBASIC3.25□□□□□ -1.89
CD28P10747 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD28P10747 SNORA62.3-201ENST00000365110 153 ntBASIC3.25□□□□□ -1.89
CD28P10747 MIR421-201ENST00000365696 85 ntBASIC3.25□□□□□ -1.89
CD28P10747 RNU6-532P-201ENST00000384318 107 ntBASIC3.25□□□□□ -1.89
CD28P10747 LAP3P1-201ENST00000403648 294 ntBASIC3.25□□□□□ -1.89
CD28P10747 AP000357.1-201ENST00000409926 1165 ntBASIC3.25□□□□□ -1.89
CD28P10747 RNU4-6P-201ENST00000410804 122 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 OR8F1P-201ENST00000425243 930 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 MRPS33P4-201ENST00000434892 317 ntBASIC3.25□□□□□ -1.89
CD28P10747 AL353898.1-201ENST00000444055 238 ntBASIC3.25□□□□□ -1.89
CD28P10747 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.25□□□□□ -1.89
CD28P10747 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 RNU6-1218P-201ENST00000458990 108 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC091153.1-201ENST00000466297 402 ntBASIC3.25□□□□□ -1.89
CD28P10747 RN7SL542P-201ENST00000467147 294 ntBASIC3.25□□□□□ -1.89
CD28P10747 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 CCDC75P1-201ENST00000469247 791 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC090013.1-201ENST00000485147 480 ntBASIC3.25□□□□□ -1.89
CD28P10747 TPT1P3-201ENST00000492841 512 ntBASIC3.25□□□□□ -1.89
CD28P10747 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 CDH12P2-201ENST00000504393 298 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.25□□□□□ -1.89
CD28P10747 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.25□□□□□ -1.89
CD28P10747 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 PPBPP1-201ENST00000510807 373 ntBASIC3.25□□□□□ -1.89
CD28P10747 FTH1P21-201ENST00000512179 511 ntBASIC3.25□□□□□ -1.89
CD28P10747 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.25□□□□□ -1.89
CD28P10747 RNU6-751P-201ENST00000516382 101 ntBASIC3.25□□□□□ -1.89
CD28P10747 RNU6-347P-201ENST00000516658 105 ntBASIC3.25□□□□□ -1.89
CD28P10747 AC008694.2-201ENST00000517591 306 ntBASIC3.25□□□□□ -1.89
CD28P10747 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.25□□□□□ -1.89
CD28P10747 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.25□□□□□ -1.89
CD28P10747 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.25□□□□□ -1.89
CD28P10747 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms