Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.3□□□□□ -1.72
RETP07949 AC107982.3-201ENST00000584957 985 ntBASIC4.3□□□□□ -1.72
RETP07949 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.3□□□□□ -1.72
RETP07949 AC068790.5-201ENST00000602741 355 ntBASIC4.3□□□□□ -1.72
RETP07949 AC123786.2-201ENST00000603459 275 ntBASIC4.3□□□□□ -1.72
RETP07949 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RETP07949 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
RETP07949 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RETP07949 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.3□□□□□ -1.72
RETP07949 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.3□□□□□ -1.72
RETP07949 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RETP07949 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.3□□□□□ -1.72
RETP07949 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RETP07949 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RETP07949 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RETP07949 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RETP07949 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
RETP07949 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RETP07949 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RETP07949 RNU1-14P-201ENST00000362759 152 ntBASIC4.29□□□□□ -1.72
RETP07949 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.29□□□□□ -1.72
RETP07949 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RETP07949 RN7SKP182-201ENST00000410772 298 ntBASIC4.29□□□□□ -1.72
RETP07949 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.29□□□□□ -1.72
RETP07949 KRR1P1-201ENST00000419430 803 ntBASIC4.29□□□□□ -1.72
RETP07949 MAPRE1P3-201ENST00000435438 796 ntBASIC4.29□□□□□ -1.72
RETP07949 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.29□□□□□ -1.72
RETP07949 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.29□□□□□ -1.72
RETP07949 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.29□□□□□ -1.72
RETP07949 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RETP07949 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RETP07949 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.29□□□□□ -1.72
RETP07949 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.29□□□□□ -1.72
RETP07949 AC092045.1-201ENST00000495716 1231 ntBASIC4.29□□□□□ -1.72
RETP07949 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.29□□□□□ -1.72
RETP07949 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.29□□□□□ -1.72
RETP07949 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.29□□□□□ -1.72
RETP07949 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.29□□□□□ -1.72
RETP07949 TRMT10BP1-201ENST00000519377 943 ntBASIC4.29□□□□□ -1.72
RETP07949 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.29□□□□□ -1.72
RETP07949 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.29□□□□□ -1.72
RETP07949 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.29□□□□□ -1.72
RETP07949 AC012468.1-201ENST00000604888 430 ntBASIC4.29□□□□□ -1.72
RETP07949 AC007179.3-201ENST00000604976 235 ntBASIC4.29□□□□□ -1.72
RETP07949 AL138721.1-201ENST00000616756 179 ntBASIC4.29□□□□□ -1.72
RETP07949 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RETP07949 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RETP07949 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RETP07949 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
RETP07949 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RETP07949 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RETP07949 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.28□□□□□ -1.72
RETP07949 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RETP07949 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.28□□□□□ -1.72
RETP07949 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.28□□□□□ -1.72
RETP07949 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.28□□□□□ -1.72
RETP07949 AC092079.1-201ENST00000558620 1985 ntBASIC4.28□□□□□ -1.72
RETP07949 AC067945.1-201ENST00000342609 618 ntBASIC4.28□□□□□ -1.72
RETP07949 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RETP07949 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RETP07949 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
RETP07949 RPS3AP25-201ENST00000411660 793 ntBASIC4.28□□□□□ -1.72
RETP07949 AC093578.1-201ENST00000415219 368 ntBASIC4.28□□□□□ -1.72
RETP07949 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.28□□□□□ -1.72
RETP07949 MTND4LP13-201ENST00000425022 298 ntBASIC4.28□□□□□ -1.72
RETP07949 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RETP07949 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.28□□□□□ -1.72
RETP07949 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.28□□□□□ -1.72
RETP07949 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RETP07949 RNA5SP519-201ENST00000516480 119 ntBASIC4.28□□□□□ -1.72
RETP07949 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.28□□□□□ -1.72
RETP07949 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.28□□□□□ -1.72
RETP07949 RFPL1S-203ENST00000539579 330 ntBASIC4.28□□□□□ -1.72
RETP07949 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.28□□□□□ -1.72
RETP07949 AC124068.1-201ENST00000563131 678 ntBASIC4.28□□□□□ -1.72
RETP07949 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.28□□□□□ -1.72
RETP07949 SRGNP1-201ENST00000603392 451 ntBASIC4.28□□□□□ -1.72
RETP07949 AC019176.2-201ENST00000611579 315 ntBASIC4.28□□□□□ -1.72
RETP07949 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.28□□□□□ -1.72
RETP07949 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.28□□□□□ -1.72
RETP07949 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RETP07949 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RETP07949 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RETP07949 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RETP07949 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RETP07949 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RETP07949 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RETP07949 RNA5SP52-201ENST00000362448 134 ntBASIC4.27□□□□□ -1.73
RETP07949 RNA5SP175-201ENST00000364275 119 ntBASIC4.27□□□□□ -1.73
RETP07949 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RETP07949 RNU1-63P-201ENST00000383902 164 ntBASIC4.27□□□□□ -1.73
RETP07949 AL136131.1-201ENST00000406079 803 ntBASIC4.27□□□□□ -1.73
RETP07949 RNA5SP36-201ENST00000410197 133 ntBASIC4.27□□□□□ -1.73
RETP07949 RN7SKP235-201ENST00000410662 305 ntBASIC4.27□□□□□ -1.73
RETP07949 AL157831.1-201ENST00000426134 473 ntBASIC4.27□□□□□ -1.73
RETP07949 AC073335.1-201ENST00000427776 363 ntBASIC4.27□□□□□ -1.73
RETP07949 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.27□□□□□ -1.73
RETP07949 CDY14P-201ENST00000431260 1014 ntBASIC4.27□□□□□ -1.73
RETP07949 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.27□□□□□ -1.73
RETP07949 CDY12P-201ENST00000440679 1015 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms