Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL139039.2-201ENST00000407436 479 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 AL512504.1-201ENST00000415494 778 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL3A1P02461 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 AL132765.1-201ENST00000434165 553 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.53□□□□□ -1.52
COL3A1P02461 RPL21P89-201ENST00000444021 467 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.53□□□□□ -1.52
COL3A1P02461 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL3A1P02461 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.53□□□□□ -1.52
COL3A1P02461 RAD23BP3-201ENST00000454157 1152 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.53□□□□□ -1.52
COL3A1P02461 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.53□□□□□ -1.52
COL3A1P02461 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.53□□□□□ -1.52
COL3A1P02461 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL3A1P02461 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 AC010376.1-201ENST00000522101 334 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.53□□□□□ -1.52
COL3A1P02461 AC027807.1-201ENST00000559921 996 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 AC007224.1-201ENST00000564410 144 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 VN1R9P-201ENST00000614184 867 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL3A1P02461 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
COL3A1P02461 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL3A1P02461 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 AC092162.3-201ENST00000624511 1624 ntBASIC5.53□□□□□ -1.52
COL3A1P02461 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.53□□□□□ -1.52
COL3A1P02461 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL3A1P02461 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.52□□□□□ -1.52
COL3A1P02461 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.52□□□□□ -1.53
COL3A1P02461 ENSAP1-201ENST00000392855 326 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 RPL32P23-201ENST00000397237 405 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AL356057.1-202ENST00000402263 756 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.52□□□□□ -1.53
COL3A1P02461 AL024507.1-201ENST00000412741 274 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.52□□□□□ -1.53
COL3A1P02461 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.52□□□□□ -1.53
COL3A1P02461 AC009518.2-201ENST00000418056 731 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.52□□□□□ -1.53
COL3A1P02461 RPS3AP44-201ENST00000425466 790 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.52□□□□□ -1.53
COL3A1P02461 MTND2P20-201ENST00000440805 661 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 GEMIN8P3-201ENST00000445417 720 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 MOB1AP2-201ENST00000446060 614 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.52□□□□□ -1.53
COL3A1P02461 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.52□□□□□ -1.53
COL3A1P02461 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.52□□□□□ -1.53
COL3A1P02461 PRDX3P4-201ENST00000470828 747 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC004263.1-201ENST00000479327 332 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC012158.1-204ENST00000483430 465 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 PPM1AP1-201ENST00000502740 1135 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC010468.3-201ENST00000508225 458 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.52□□□□□ -1.53
COL3A1P02461 RNU5A-4P-201ENST00000516588 111 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AL356057.1-201ENST00000533798 831 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC068993.1-201ENST00000546724 589 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.52□□□□□ -1.53
COL3A1P02461 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.52□□□□□ -1.53
COL3A1P02461 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL3A1P02461 AC093227.2-201ENST00000589357 285 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.52□□□□□ -1.53
COL3A1P02461 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 HULC.1-201ENST00000612720 240 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.52□□□□□ -1.53
COL3A1P02461 AL669942.2-201ENST00000620352 697 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC097460.3-201ENST00000623099 442 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 AC010608.2-201ENST00000624830 470 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 MIR3974-201ENST00000637126 96 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 MTCO1P22-201ENST00000604619 1360 ntBASIC5.52□□□□□ -1.53
COL3A1P02461 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
COL3A1P02461 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.52□□□□□ -1.53
COL3A1P02461 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL3A1P02461 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL3A1P02461 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL3A1P02461 RN7SKP263-201ENST00000411194 309 ntBASIC5.51□□□□□ -1.53
COL3A1P02461 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL3A1P02461 RPS23P10-201ENST00000416185 486 ntBASIC5.51□□□□□ -1.53
COL3A1P02461 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.51□□□□□ -1.53
COL3A1P02461 AL358176.3-201ENST00000420757 454 ntBASIC5.51□□□□□ -1.53
COL3A1P02461 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.51□□□□□ -1.53
COL3A1P02461 TRGV7-201ENST00000427089 353 ntBASIC5.51□□□□□ -1.53
COL3A1P02461 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.51□□□□□ -1.53
COL3A1P02461 AL358472.1-201ENST00000431295 329 ntBASIC5.51□□□□□ -1.53
COL3A1P02461 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.51□□□□□ -1.53
COL3A1P02461 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.51□□□□□ -1.53
COL3A1P02461 MTCO2P7-201ENST00000446518 666 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms