Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC114495.1-201ENST00000441274 436 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 MTCYBP21-201ENST00000443300 1113 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL500522.2-201ENST00000448562 343 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 IFNWP4-201ENST00000453148 294 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 MTCO3P16-201ENST00000454456 754 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC108729.2-201ENST00000476543 840 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 BNIP3P41-201ENST00000503774 571 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 SCARNA22-201ENST00000503991 125 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC007016.1-201ENST00000512110 244 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 RNU2-30P-201ENST00000516209 141 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 SOX5P1-201ENST00000524155 1127 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 OR5AZ1P-201ENST00000527448 943 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC008033.2-201ENST00000542626 177 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC093014.1-201ENST00000548926 724 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC063950.1-201ENST00000552036 308 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL133457.1-201ENST00000564251 987 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 BGLT3-201ENST00000564523 994 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC069366.1-201ENST00000583159 838 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AP003117.1-201ENST00000602771 554 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC135178.6-201ENST00000605314 398 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC110792.4-201ENST00000609843 298 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AP000255.1-201ENST00000610276 676 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC090617.9-201ENST00000623751 147 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC116563.2-201ENST00000624751 535 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC006065.6-201ENST00000625201 545 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL773545.4-201ENST00000637262 310 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 FP325313.1-201ENST00000638228 703 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL513478.4-201ENST00000641636 310 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 LINC01808-202ENST00000641680 1116 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AL049555.1-201ENST00000562834 1933 ntBASIC3.16□□□□□ -1.9
HLA-DQA1P01909 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DQA1P01909 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
HLA-DQA1P01909 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DQA1P01909 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
HLA-DQA1P01909 RNF6P1-201ENST00000444889 1784 ntBASIC3.15□□□□□ -1.9
HLA-DQA1P01909 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
HLA-DQA1P01909 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.15□□□□□ -1.9
HLA-DQA1P01909 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DQA1P01909 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 IGKV7-3-201ENST00000357453 298 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 SNORA37-201ENST00000384504 129 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 UBE2V1P15-201ENST00000407776 448 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC019050.1-201ENST00000418508 492 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 FO393419.3-201ENST00000428741 282 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 NRBF2P3-201ENST00000432731 865 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 BMS1P19-201ENST00000433925 393 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC016831.4-201ENST00000438302 307 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC092809.1-201ENST00000441469 474 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 VN1R25P-201ENST00000443385 738 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 RPS3AP53-201ENST00000454716 778 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 VN1R40P-201ENST00000455196 941 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 PPIAP21-201ENST00000464473 501 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 PPIAP15-201ENST00000479662 484 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 RN7SL826P-201ENST00000479724 288 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 NDUFA5P12-201ENST00000503796 343 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 RN7SKP276-201ENST00000516242 268 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 BRD9P1-201ENST00000529855 560 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC006064.5-201ENST00000541782 248 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 ZNF92P3-201ENST00000596594 954 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms