Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AP001269.3-201ENST00000588718 329 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 FAM27B-201ENST00000610601 213 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC140725.3-201ENST00000616193 880 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC087385.3-201ENST00000620477 187 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-2O95096 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-2O95096 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
NKX2-2O95096 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-2O95096 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 RN7SKP149-201ENST00000363008 344 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 SNORD65.1-201ENST00000390889 71 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AL590762.2-201ENST00000395798 571 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AL592291.1-201ENST00000403830 352 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC004022.2-201ENST00000413824 193 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AL445487.1-201ENST00000415694 1580 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 HMGB1P49-201ENST00000418882 569 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AL358176.3-201ENST00000420757 454 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC007435.1-201ENST00000421086 415 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 RPL7P57-201ENST00000423238 740 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC007327.1-201ENST00000447461 264 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-2O95096 COX6CP18-201ENST00000448769 222 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 Z99714.1-201ENST00000450463 807 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC010733.1-201ENST00000451515 401 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-2O95096 CYCSP34-201ENST00000458172 304 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AL591473.1-201ENST00000464297 313 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC023424.1-201ENST00000496058 459 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 SCARNA22-201ENST00000503991 125 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-2O95096 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC009117.1-201ENST00000563948 554 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC016180.1-201ENST00000567945 403 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-2O95096 MIR4512-201ENST00000583257 77 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC113368.1-201ENST00000603736 382 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 AC013244.1-201ENST00000604279 193 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 AC006927.4-201ENST00000639187 543 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NKX2-2O95096 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-2O95096 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 DCAF13P3-201ENST00000561147 1334 ntBASIC4.42□□□□□ -1.7
NKX2-2O95096 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-2O95096 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-2O95096 ASNSP1-201ENST00000518311 1939 ntBASIC4.41□□□□□ -1.7
NKX2-2O95096 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-2O95096 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.41□□□□□ -1.7
NKX2-2O95096 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-2O95096 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NKX2-2O95096 NACA3P-201ENST00000359690 648 ntBASIC4.41□□□□□ -1.7
NKX2-2O95096 RNA5SP391-201ENST00000363456 119 ntBASIC4.41□□□□□ -1.7
NKX2-2O95096 RN7SKP224-201ENST00000364140 325 ntBASIC4.41□□□□□ -1.7
NKX2-2O95096 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-2O95096 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-2O95096 SNORD116-23-201ENST00000384645 92 ntBASIC4.41□□□□□ -1.7
NKX2-2O95096 AL645733.1-201ENST00000402250 217 ntBASIC4.41□□□□□ -1.7
NKX2-2O95096 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms