Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RN7SKP147-201ENST00000517154 244 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.44□□□□□ -1.86
UPK1BO75841 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.44□□□□□ -1.86
UPK1BO75841 OR4C2P-201ENST00000530855 1064 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AC011602.1-201ENST00000546484 331 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1BO75841 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.44□□□□□ -1.86
UPK1BO75841 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.44□□□□□ -1.86
UPK1BO75841 NF1P5-201ENST00000588287 448 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.44□□□□□ -1.86
UPK1BO75841 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.44□□□□□ -1.86
UPK1BO75841 AC098935.2-201ENST00000604222 466 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AL592436.1-201ENST00000605135 558 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AC084036.1-201ENST00000609190 508 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AP004607.9-201ENST00000618202 316 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AP000843.1-201ENST00000624880 701 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1BO75841 AC009452.1-201ENST00000640823 606 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.44□□□□□ -1.86
UPK1BO75841 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1BO75841 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1BO75841 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1BO75841 MFSD8-220ENST00000641243 1422 ntBASIC3.44□□□□□ -1.86
UPK1BO75841 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.44□□□□□ -1.86
UPK1BO75841 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 RNF6P1-201ENST00000444889 1784 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
UPK1BO75841 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.43□□□□□ -1.86
UPK1BO75841 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
UPK1BO75841 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 IGKV7-3-201ENST00000357453 298 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 RNA5SP510-201ENST00000364697 99 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 RNU6-452P-201ENST00000384406 107 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 RPS26P8-201ENST00000393490 348 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 RNA5SP113-201ENST00000410486 84 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 RN7SKP106-201ENST00000410832 272 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 RPS12P23-201ENST00000419579 400 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.43□□□□□ -1.86
UPK1BO75841 AL358472.1-201ENST00000431295 329 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1BO75841 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 ELOCP11-201ENST00000436690 332 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 CNOT7P2-201ENST00000441051 832 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 ELOCP16-201ENST00000444494 332 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 HMGB1P5-202ENST00000451497 985 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 AC063943.1-201ENST00000465434 453 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 AC072052.1-201ENST00000496556 306 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 RN7SL649P-201ENST00000496974 275 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 RNA5SP473-201ENST00000516402 125 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 IGKV2-23-201ENST00000518729 323 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 OR5AP1P-201ENST00000529730 940 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.43□□□□□ -1.86
UPK1BO75841 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1BO75841 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.43□□□□□ -1.86
UPK1BO75841 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.43□□□□□ -1.86
UPK1BO75841 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.43□□□□□ -1.86
UPK1BO75841 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 AL512329.2-201ENST00000607350 548 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 AC092653.1-201ENST00000608509 531 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 MIR6780B-201ENST00000610307 79 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 AL133243.1-201ENST00000614487 366 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 MIR7973-1-201ENST00000614683 76 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 AL445363.3-201ENST00000623080 671 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
UPK1BO75841 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPK1BO75841 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.42□□□□□ -1.86
UPK1BO75841 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1BO75841 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1BO75841 AC058791.1-201ENST00000608412 3198 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AC090229.1-201ENST00000590983 1609 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
UPK1BO75841 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1BO75841 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 RNU6-328P-201ENST00000390887 106 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 VN1R12P-201ENST00000403778 876 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 SNORA11F-201ENST00000408237 128 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms