Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RPS4XP4-201ENST00000443195 763 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 REG1CP-206ENST00000447469 496 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 GEMIN2P1-201ENST00000454246 752 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 Z82190.1-201ENST00000454534 490 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 BTF3P5-201ENST00000457252 467 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 FAM172BP-201ENST00000487497 1089 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA3O43365 AC012170.1-201ENST00000495139 359 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 AC022447.3-201ENST00000506865 495 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 AC093815.1-201ENST00000508637 280 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 IGKV2-19-201ENST00000518132 283 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA3O43365 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA3O43365 AP000648.1-201ENST00000529682 397 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXA3O43365 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXA3O43365 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA3O43365 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXA3O43365 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA3O43365 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA3O43365 SULT1C2P1-202ENST00000562418 459 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA3O43365 MEMO1P5-201ENST00000604810 406 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 BCRP9-201ENST00000605312 388 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 CR392039.4-201ENST00000624968 501 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA3O43365 AL049767.1-202ENST00000637826 242 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA3O43365 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA3O43365 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA3O43365 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
HOXA3O43365 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXA3O43365 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 FARSBP1-201ENST00000435808 1778 ntBASIC4.83□□□□□ -1.64
HOXA3O43365 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA3O43365 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA3O43365 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
HOXA3O43365 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXA3O43365 AL592429.1-201ENST00000403909 1473 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA3O43365 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA3O43365 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXA3O43365 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HOXA3O43365 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA3O43365 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA3O43365 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA3O43365 RNU6-984P-201ENST00000363236 109 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 RN7SKP128-201ENST00000364270 303 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 RNY4P34-201ENST00000364779 95 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA3O43365 Y_RNA.402-201ENST00000383972 102 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 OR7E101P-201ENST00000400428 513 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 PRRC2CP1-201ENST00000404428 159 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 RN7SKP266-201ENST00000410232 287 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 PRELID3BP11-201ENST00000414230 479 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 RPL35AP3-201ENST00000414680 288 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 SDHDP6-201ENST00000414693 480 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA3O43365 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA3O43365 AL139413.1-201ENST00000421309 217 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 COX6CP17-201ENST00000421389 185 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA3O43365 AC073464.1-201ENST00000429823 534 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AL358934.1-201ENST00000432346 324 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AC009961.2-201ENST00000435771 251 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA3O43365 MTCO1P42-201ENST00000457379 726 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AC023141.9-201ENST00000458734 412 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 RNU7-136P-201ENST00000458819 69 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HOXA3O43365 RPS3AP14-201ENST00000483907 780 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 CR383656.1-201ENST00000484916 377 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AC124945.1-201ENST00000485133 188 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AC112204.1-201ENST00000502591 103 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AC019235.1-201ENST00000503847 207 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA3O43365 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXA3O43365 RNU6-347P-201ENST00000516658 105 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 SNORA70.20-201ENST00000516848 126 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA3O43365 SOD1P3-201ENST00000518682 454 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AP003467.2-201ENST00000520175 319 ntBASIC4.82□□□□□ -1.64
HOXA3O43365 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms