Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
MSH5O43196 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
MSH5O43196 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 RNY1P11-201ENST00000363759 113 ntBASIC10.97□□□□□ -0.65
MSH5O43196 AC093392.1-201ENST00000366280 340 ntBASIC10.97□□□□□ -0.65
MSH5O43196 AC133644.1-201ENST00000398171 937 ntBASIC10.97□□□□□ -0.65
MSH5O43196 RNA5SP107-201ENST00000411358 122 ntBASIC10.97□□□□□ -0.65
MSH5O43196 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC10.97□□□□□ -0.65
MSH5O43196 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 EEF1GP7-201ENST00000422983 703 ntBASIC10.97□□□□□ -0.65
MSH5O43196 RPL23AP19-201ENST00000436229 369 ntBASIC10.97□□□□□ -0.65
MSH5O43196 RPL23AP3-201ENST00000453844 468 ntBASIC10.97□□□□□ -0.65
MSH5O43196 Y_RNA.706-201ENST00000516933 99 ntBASIC10.97□□□□□ -0.65
MSH5O43196 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC10.97□□□□□ -0.65
MSH5O43196 VN1R85P-201ENST00000601587 426 ntBASIC10.97□□□□□ -0.65
MSH5O43196 BNIP3P15-201ENST00000604600 301 ntBASIC10.97□□□□□ -0.65
MSH5O43196 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC10.97□□□□□ -0.65
MSH5O43196 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 AC055716.2-201ENST00000552545 2441 ntBASIC10.97□□□□□ -0.65
MSH5O43196 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
MSH5O43196 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
MSH5O43196 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC10.96□□□□□ -0.65
MSH5O43196 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
MSH5O43196 MAPK10-347ENST00000641762 2856 ntBASIC10.96□□□□□ -0.65
MSH5O43196 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
MSH5O43196 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MSH5O43196 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC10.96□□□□□ -0.65
MSH5O43196 AL136164.4-201ENST00000625013 2135 ntBASIC10.96□□□□□ -0.65
MSH5O43196 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
MSH5O43196 FER-202ENST00000438717 1531 ntTSL 2 BASIC10.96□□□□□ -0.65
MSH5O43196 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC10.96□□□□□ -0.65
MSH5O43196 Y_RNA.220-201ENST00000364244 109 ntBASIC10.96□□□□□ -0.65
MSH5O43196 RN7SKP139-201ENST00000410411 293 ntBASIC10.96□□□□□ -0.65
MSH5O43196 ELOCP21-201ENST00000412558 336 ntBASIC10.96□□□□□ -0.65
MSH5O43196 RPS10P2-201ENST00000430953 494 ntBASIC10.96□□□□□ -0.65
MSH5O43196 AC127537.2-201ENST00000439258 465 ntBASIC10.96□□□□□ -0.65
MSH5O43196 AC242426.2-201ENST00000446956 795 ntBASIC10.96□□□□□ -0.65
MSH5O43196 RN7SL815P-201ENST00000470970 290 ntBASIC10.96□□□□□ -0.65
MSH5O43196 RPL31P60-201ENST00000478450 367 ntBASIC10.96□□□□□ -0.65
MSH5O43196 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MSH5O43196 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC10.96□□□□□ -0.65
MSH5O43196 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC10.96□□□□□ -0.65
MSH5O43196 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
MSH5O43196 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC10.96□□□□□ -0.65
MSH5O43196 MIR4744-201ENST00000581563 82 ntBASIC10.96□□□□□ -0.65
MSH5O43196 AL035410.2-201ENST00000604963 864 ntBASIC10.96□□□□□ -0.65
MSH5O43196 AC123788.2-201ENST00000612290 283 ntBASIC10.96□□□□□ -0.65
MSH5O43196 AC068234.2-201ENST00000619646 522 ntBASIC10.96□□□□□ -0.65
MSH5O43196 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
MSH5O43196 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MSH5O43196 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MSH5O43196 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC10.96□□□□□ -0.66
MSH5O43196 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MSH5O43196 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MSH5O43196 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MSH5O43196 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MSH5O43196 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MSH5O43196 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MSH5O43196 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MSH5O43196 Z73965.1-201ENST00000623412 2297 ntBASIC10.95□□□□□ -0.66
MSH5O43196 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
MSH5O43196 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC10.95□□□□□ -0.66
MSH5O43196 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
MSH5O43196 Y_RNA.328-201ENST00000365208 113 ntBASIC10.95□□□□□ -0.66
MSH5O43196 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MSH5O43196 Y_RNA.466-201ENST00000384294 113 ntBASIC10.95□□□□□ -0.66
MSH5O43196 RN7SKP154-201ENST00000410136 290 ntBASIC10.95□□□□□ -0.66
MSH5O43196 AC006461.1-201ENST00000412637 326 ntBASIC10.95□□□□□ -0.66
MSH5O43196 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC10.95□□□□□ -0.66
MSH5O43196 AC130472.1-201ENST00000427885 309 ntBASIC10.95□□□□□ -0.66
MSH5O43196 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC10.95□□□□□ -0.66
MSH5O43196 AC016734.1-201ENST00000436998 654 ntBASIC10.95□□□□□ -0.66
MSH5O43196 AC104849.1-201ENST00000462623 405 ntBASIC10.95□□□□□ -0.66
MSH5O43196 TOMM22P6-201ENST00000465035 409 ntBASIC10.95□□□□□ -0.66
MSH5O43196 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC10.95□□□□□ -0.66
MSH5O43196 AC010368.1-201ENST00000510160 456 ntBASIC10.95□□□□□ -0.66
MSH5O43196 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC10.95□□□□□ -0.66
MSH5O43196 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC10.95□□□□□ -0.66
MSH5O43196 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC10.95□□□□□ -0.66
MSH5O43196 AC090615.1-201ENST00000577519 154 ntBASIC10.95□□□□□ -0.66
MSH5O43196 Y_RNA.757-201ENST00000578934 114 ntBASIC10.95□□□□□ -0.66
MSH5O43196 AC011444.4-201ENST00000586415 418 ntBASIC10.95□□□□□ -0.66
MSH5O43196 AC020765.1-201ENST00000604296 328 ntBASIC10.95□□□□□ -0.66
MSH5O43196 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC10.95□□□□□ -0.66
MSH5O43196 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC10.95□□□□□ -0.66
MSH5O43196 CARMN-212ENST00000614896 536 ntTSL 5 BASIC10.95□□□□□ -0.66
MSH5O43196 MIR6505-201ENST00000617206 71 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms