Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 AC062022.1-201ENST00000451026 1684 ntBASIC6.31□□□□□ -1.4
SOX1O00570 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 MIR320B1-201ENST00000390209 79 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC093162.1-201ENST00000419682 124 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 ISCA1P6-201ENST00000427740 390 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 RN7SL51P-201ENST00000468230 285 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC015724.1-201ENST00000478577 156 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 AC106800.2-201ENST00000514009 1103 ntBASIC6.31□□□□□ -1.4
SOX1O00570 RNU6-1045P-201ENST00000516321 107 ntBASIC6.31□□□□□ -1.4
SOX1O00570 SCARNA6.1-201ENST00000516989 238 ntBASIC6.31□□□□□ -1.4
SOX1O00570 RNU2-46P-201ENST00000517038 113 ntBASIC6.31□□□□□ -1.4
SOX1O00570 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 AL121594.2-201ENST00000541658 472 ntBASIC6.31□□□□□ -1.4
SOX1O00570 HIF1AP1-201ENST00000553642 175 ntBASIC6.31□□□□□ -1.4
SOX1O00570 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 AL121821.2-201ENST00000556081 394 ntBASIC6.31□□□□□ -1.4
SOX1O00570 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.31□□□□□ -1.4
SOX1O00570 AL845331.3-202ENST00000562856 261 ntBASIC6.31□□□□□ -1.4
SOX1O00570 RNU4ATAC-201ENST00000580972 127 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 AC027229.1-201ENST00000583887 253 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 KC877982.1-201ENST00000602313 470 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 AC090948.2-201ENST00000607363 564 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX1O00570 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 AC093311.1-201ENST00000506586 2021 ntBASIC6.31□□□□□ -1.4
SOX1O00570 AL133243.4-201ENST00000623116 3109 ntBASIC6.31□□□□□ -1.4
SOX1O00570 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX1O00570 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX1O00570 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX1O00570 HDAC1P2-201ENST00000453661 1398 ntBASIC6.31□□□□□ -1.4
SOX1O00570 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.3□□□□□ -1.4
SOX1O00570 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SOX1O00570 MTND5P23-201ENST00000430812 1655 ntBASIC6.3□□□□□ -1.4
SOX1O00570 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 IGKV7-3-201ENST00000357453 298 ntBASIC6.3□□□□□ -1.4
SOX1O00570 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 AL158073.1-201ENST00000426848 1104 ntBASIC6.3□□□□□ -1.4
SOX1O00570 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.3□□□□□ -1.4
SOX1O00570 OR4F13P-201ENST00000428478 931 ntBASIC6.3□□□□□ -1.4
SOX1O00570 RBMY2QP-201ENST00000429799 1147 ntBASIC6.3□□□□□ -1.4
SOX1O00570 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 AL445928.1-201ENST00000435545 222 ntBASIC6.3□□□□□ -1.4
SOX1O00570 HMGB3P12-201ENST00000438745 556 ntBASIC6.3□□□□□ -1.4
SOX1O00570 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 AC019185.1-201ENST00000442718 389 ntBASIC6.3□□□□□ -1.4
SOX1O00570 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 RPS20P20-201ENST00000460498 340 ntBASIC6.3□□□□□ -1.4
SOX1O00570 AC083795.1-201ENST00000491760 320 ntBASIC6.3□□□□□ -1.4
SOX1O00570 NIFKP7-201ENST00000503365 834 ntBASIC6.3□□□□□ -1.4
SOX1O00570 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 AC095057.1-201ENST00000507583 168 ntBASIC6.3□□□□□ -1.4
SOX1O00570 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.3□□□□□ -1.4
SOX1O00570 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.3□□□□□ -1.4
SOX1O00570 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 OR4A12P-201ENST00000530847 918 ntBASIC6.3□□□□□ -1.4
SOX1O00570 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.3□□□□□ -1.4
SOX1O00570 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.3□□□□□ -1.4
SOX1O00570 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 AC234771.5-201ENST00000600161 514 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms