Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FAM133CP-201ENST00000332869 704 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 RNU6-839P-201ENST00000363347 108 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 RNY3P9-201ENST00000384727 106 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 MIR765-201ENST00000390226 114 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 TAF9BP1-201ENST00000396646 746 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 RNA5SP345-201ENST00000410646 108 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 NRBF2P2-201ENST00000413087 861 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXN3O00409 RGS17P1-201ENST00000423358 553 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXN3O00409 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 NPM1P33-201ENST00000438918 872 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 USP9YP22-201ENST00000438971 294 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.25□□□□□ -1.57
FOXN3O00409 RPL23AP56-201ENST00000460778 453 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 PPIAP21-201ENST00000464473 501 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXN3O00409 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 OR5H4P-201ENST00000510851 923 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AC005351.1-201ENST00000511152 786 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 SMARCE1P4-201ENST00000523647 241 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
FOXN3O00409 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 MRPS36P5-201ENST00000551909 298 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 SERPINE4P-201ENST00000554978 281 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AL354943.1-201ENST00000572103 781 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 NF1P5-201ENST00000588287 448 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AC008687.2-201ENST00000597865 520 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AC069545.1-201ENST00000605671 358 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.25□□□□□ -1.57
FOXN3O00409 AC124312.6-202ENST00000623624 418 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AP003485.2-201ENST00000623636 610 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 AC079416.3-201ENST00000624479 549 ntBASIC5.25□□□□□ -1.57
FOXN3O00409 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.25□□□□□ -1.57
FOXN3O00409 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXN3O00409 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.25□□□□□ -1.57
FOXN3O00409 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
FOXN3O00409 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
FOXN3O00409 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
FOXN3O00409 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
FOXN3O00409 AC008549.2-201ENST00000333482 706 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 RNU6-582P-201ENST00000362989 107 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXN3O00409 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FOXN3O00409 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 AL078599.1-201ENST00000402075 293 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 RNU2-42P-201ENST00000410697 113 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AL161449.1-201ENST00000414531 1199 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 BX510359.3-201ENST00000422168 306 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AL365338.1-201ENST00000422282 858 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 EIF4HP2-201ENST00000424380 563 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 MTND5P25-201ENST00000430499 799 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXN3O00409 EXTL2P1-201ENST00000446218 416 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 NDUFA5P7-201ENST00000452914 242 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXN3O00409 AC109462.1-201ENST00000491087 368 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC006499.3-201ENST00000506077 748 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXN3O00409 AC116353.3-201ENST00000511215 249 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.24□□□□□ -1.57
FOXN3O00409 RNU5A-4P-201ENST00000516588 111 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 RN7SKP147-201ENST00000517154 244 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 OR10G5P-201ENST00000532733 358 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.24□□□□□ -1.57
FOXN3O00409 BNIP3P1-201ENST00000547295 580 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXN3O00409 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.24□□□□□ -1.57
FOXN3O00409 GTF2IP8-201ENST00000560687 584 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC009094.1-201ENST00000564443 426 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 AC010424.2-201ENST00000607594 443 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.24□□□□□ -1.57
FOXN3O00409 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 AC019206.1-201ENST00000621938 425 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.24□□□□□ -1.57
FOXN3O00409 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms