Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 HMGB1P5-202ENST00000451497 985 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 RPS20P4-201ENST00000461659 355 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.79□□□□□ -1.48
RFXAPO00287 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.79□□□□□ -1.48
RFXAPO00287 RPS3AP17-201ENST00000472594 777 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AC016687.1-201ENST00000482574 353 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 HMGN1P12-201ENST00000499125 195 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.79□□□□□ -1.48
RFXAPO00287 AC105252.1-201ENST00000503089 286 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.79□□□□□ -1.48
RFXAPO00287 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.79□□□□□ -1.48
RFXAPO00287 RNA5SP373-201ENST00000517271 95 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.79□□□□□ -1.48
RFXAPO00287 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.79□□□□□ -1.48
RFXAPO00287 AC103968.1-201ENST00000557841 573 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 ATP5J2P6-201ENST00000565203 266 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 SEPT7P9-203ENST00000604116 343 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AL031320.1-201ENST00000604177 357 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AC010680.3-201ENST00000604215 520 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AP000238.1-201ENST00000608759 426 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 AL355974.3-201ENST00000617383 467 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFXAPO00287 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.79□□□□□ -1.48
RFXAPO00287 AC109454.4-201ENST00000623411 649 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RFXAPO00287 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.79□□□□□ -1.48
RFXAPO00287 VN2R3P-201ENST00000422626 1412 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.79□□□□□ -1.48
RFXAPO00287 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFXAPO00287 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFXAPO00287 AC132825.1-201ENST00000463573 2247 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFXAPO00287 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFXAPO00287 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFXAPO00287 AC144833.1-201ENST00000567953 4089 ntBASIC5.79□□□□□ -1.48
RFXAPO00287 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.79□□□□□ -1.48
RFXAPO00287 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 SNURFL-201ENST00000309296 343 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 RNU4-73P-201ENST00000363164 141 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 RN7SKP113-201ENST00000363891 295 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 RNU6-374P-201ENST00000364146 108 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 Y_RNA.394-201ENST00000383942 103 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 RNA5SP87-201ENST00000384155 118 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 MT-RNR2-201ENST00000387347 1559 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 PIGPP2-201ENST00000411569 458 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 AC098592.2-201ENST00000413158 265 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.78□□□□□ -1.48
RFXAPO00287 LINC00993-201ENST00000420453 540 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 PRPF38AP2-201ENST00000438179 851 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 AC079776.3-201ENST00000450665 370 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 HMGB1P44-201ENST00000508597 572 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.78□□□□□ -1.48
RFXAPO00287 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 OR7K1P-201ENST00000546439 926 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 AC044913.1-201ENST00000557200 430 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.78□□□□□ -1.48
RFXAPO00287 MIR4420-201ENST00000583944 77 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 RMST_5.1-201ENST00000618704 126 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 AC138649.3-201ENST00000622154 254 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.78□□□□□ -1.48
RFXAPO00287 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RFXAPO00287 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 AC068769.1-201ENST00000474767 2426 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RFXAPO00287 AL353743.4-201ENST00000422653 1547 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 NLRP3P1-201ENST00000622303 1785 ntBASIC5.78□□□□□ -1.48
RFXAPO00287 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFXAPO00287 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RFXAPO00287 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFXAPO00287 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFXAPO00287 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RFXAPO00287 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.77□□□□□ -1.49
RFXAPO00287 AC138393.1-206ENST00000540997 1886 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms