Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 IGLVIV-65-201ENST00000517313 360 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC233266.2-201ENST00000567067 528 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC004775.1-201ENST00000607389 753 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 AC012409.3-201ENST00000611343 981 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 MIR1264-201ENST00000616374 69 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF6Q9Y252 CYP1D1P-201ENST00000416662 1433 ntBASIC4.12□□□□□ -1.75
RNF6Q9Y252 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RNF6Q9Y252 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC139769.1-204ENST00000472297 1931 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AL356489.2-201ENST00000566968 3528 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 Y_RNA.126-201ENST00000363382 111 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 OR6C69P-201ENST00000394268 893 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 RNU2-17P-201ENST00000410290 190 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 XKRYP4-201ENST00000414395 483 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AL356387.2-201ENST00000422272 243 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 RPL7AP25-201ENST00000423357 805 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 TPTE2P6-202ENST00000445572 1007 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 XKRYP5-201ENST00000449659 483 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 RPS20P4-201ENST00000461659 355 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC020898.1-201ENST00000474167 787 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 PARP4P3-201ENST00000510265 317 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 SETP12-201ENST00000514068 805 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC103833.1-201ENST00000517442 172 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 NPM1P6-201ENST00000521088 871 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 OR5M7P-201ENST00000526140 972 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AL109766.1-201ENST00000555080 552 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC068446.3-201ENST00000555285 382 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 BNIP3P5-201ENST00000562290 498 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 LINC00557-201ENST00000563184 1279 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AL160290.3-201ENST00000604869 165 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC090948.1-201ENST00000607464 549 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AL645927.2-201ENST00000618350 349 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RNF6Q9Y252 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF6Q9Y252 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
RNF6Q9Y252 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC021146.4-201ENST00000309229 279 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 OR4K17-201ENST00000315543 1032 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 GCNT6-201ENST00000379591 934 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 HMGB1P10-201ENST00000395823 563 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 RPL31P52-201ENST00000407532 367 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms