Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 RAD17P2-201ENST00000451754 1977 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 DDX18P5-201ENST00000534547 1306 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 DDX18P3-201ENST00000404856 2007 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 MIR764-201ENST00000390811 85 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 RN7SKP16-201ENST00000410180 299 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC008885.1-201ENST00000514930 301 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC004836.1-201ENST00000623032 634 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 EXOC5P1-201ENST00000510543 1969 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL391262.1-201ENST00000556558 1992 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL591419.1-201ENST00000427423 339 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 SNRPGP9-201ENST00000456025 225 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 RNA5SP356-201ENST00000515972 94 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC004024.1-201ENST00000549244 247 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 QTRT1P1-201ENST00000604344 1078 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 MAPK6PS2-201ENST00000379571 2060 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 Z97055.1-201ENST00000419730 712 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL672167.1-205ENST00000641112 3080 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 DNM1P47-203ENST00000571780 12667 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL512310.1-201ENST00000548639 172 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC133552.5-201ENST00000604266 540 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL160290.3-201ENST00000604869 165 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC026422.1-201ENST00000623961 452 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 NMNAT1P2-201ENST00000435192 860 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 VN1R25P-201ENST00000443385 738 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AL139174.1-201ENST00000531489 886 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC106734.1-201ENST00000568646 663 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AC004832.5-201ENST00000608677 401 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 PHKBP1-201ENST00000450951 1951 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.57□□□□□ -2.16
MACF1Q9UPN3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
MACF1Q9UPN3 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms