Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC107027.3-201ENST00000565095 3473 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 RN7SKP74-201ENST00000362849 309 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 MIR195-201ENST00000385194 87 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 SNORA11F-201ENST00000408237 128 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 GAPDHP49-201ENST00000421421 961 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 RPL23AP25-201ENST00000430973 463 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC073143.1-201ENST00000436316 395 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC000041.1-201ENST00000439655 175 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AL096803.2-201ENST00000450032 677 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 RPS20P4-201ENST00000461659 355 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 CEACAMP10-202ENST00000495431 496 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 CDH12P2-201ENST00000504393 298 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AP003717.3-201ENST00000544832 1180 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC068993.1-201ENST00000546724 589 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC087888.1-201ENST00000550884 1254 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC234772.3-201ENST00000602277 528 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AL354984.3-201ENST00000604803 325 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC106052.1-201ENST00000608029 497 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 SNORD91B-202ENST00000608459 222 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC079395.3-201ENST00000615161 484 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 uc_338.13-201ENST00000618243 179 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 AC007546.1-201ENST00000619452 559 ntBASIC4.71□□□□□ -1.66
SIX4Q9UIU6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SIX4Q9UIU6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 RNU5B-1-201ENST00000363286 116 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 RNU1-44P-201ENST00000384453 163 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 NRBF2P2-201ENST00000413087 861 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 MTATP6P20-201ENST00000414147 562 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 P2RY10P2-201ENST00000416730 913 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC023128.2-201ENST00000420880 1223 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 OSTCP5-201ENST00000425293 453 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC011998.1-201ENST00000433403 117 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 RPS3AP54-201ENST00000435535 734 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 MTND1P31-201ENST00000449206 961 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 HSPE1P22-201ENST00000456856 327 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 RPL7AP52-201ENST00000458096 790 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 RPL35AP15-201ENST00000468042 339 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC020898.1-201ENST00000474167 787 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC026979.1-201ENST00000492525 396 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 RN7SKP141-201ENST00000516167 338 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 HIGD1AP18-201ENST00000520730 278 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC090151.1-201ENST00000520784 730 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 MIR4789-201ENST00000577469 82 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC083809.1-201ENST00000615051 472 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC009464.1-201ENST00000615731 469 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 AC022079.2-201ENST00000619739 566 ntBASIC4.7□□□□□ -1.66
SIX4Q9UIU6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms