Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL390816.3-201ENST00000604527 1066 ntBASIC4.85□□□□□ -1.63
SCN11AQ9UI33 AC005972.3-201ENST00000606304 481 ntBASIC4.85□□□□□ -1.63
SCN11AQ9UI33 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SCN11AQ9UI33 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 DBIP2-201ENST00000419076 262 ntBASIC4.84□□□□□ -1.63
SCN11AQ9UI33 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 GNG5P5-201ENST00000420444 220 ntBASIC4.84□□□□□ -1.63
SCN11AQ9UI33 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 DEFB109D-201ENST00000529497 240 ntBASIC4.84□□□□□ -1.63
SCN11AQ9UI33 TRAV15-201ENST00000556680 249 ntBASIC4.84□□□□□ -1.63
SCN11AQ9UI33 AL392088.2-201ENST00000637607 285 ntBASIC4.84□□□□□ -1.63
SCN11AQ9UI33 AP000553.6-201ENST00000641242 118 ntBASIC4.84□□□□□ -1.63
SCN11AQ9UI33 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN11AQ9UI33 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SCN11AQ9UI33 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SCN11AQ9UI33 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SCN11AQ9UI33 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SCN11AQ9UI33 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SCN11AQ9UI33 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SCN11AQ9UI33 RNU1-108P-201ENST00000362556 161 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 RNA5SP72-201ENST00000364442 117 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 VN1R25P-201ENST00000443385 738 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 VN1R40P-201ENST00000455196 941 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 RPS4XP10-201ENST00000465034 731 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 RPL6P9-201ENST00000466502 859 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AC108941.1-201ENST00000502853 530 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 OR5B10P-201ENST00000532869 642 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AC005000.2-201ENST00000605468 310 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 ATE1-AS1-202ENST00000636460 506 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AC058791.1-201ENST00000608412 3198 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AC097504.1-201ENST00000515103 2415 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 DPPA2P2-201ENST00000418220 897 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 OR6C71P-201ENST00000432580 913 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 PDSS1P2-201ENST00000449397 678 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 MIR5195-201ENST00000583555 115 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 AC244258.1-201ENST00000637553 1071 ntBASIC4.83□□□□□ -1.64
SCN11AQ9UI33 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN11AQ9UI33 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 RNA5SP52-201ENST00000362448 134 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AL645931.1-201ENST00000439737 410 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AC008481.1-201ENST00000463278 396 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 WBP1LP4-201ENST00000505043 344 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 TCP11X3P-202ENST00000514289 1254 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 RANP9-201ENST00000519957 271 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 OR7A8P-201ENST00000595427 913 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 OR7M1P-201ENST00000608946 533 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN11AQ9UI33 AL121839.2-201ENST00000565058 6943 ntBASIC4.82□□□□□ -1.64
SCN11AQ9UI33 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN11AQ9UI33 OR52E6-202ENST00000379946 954 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 MIR34B-201ENST00000385076 84 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 AC010740.1-201ENST00000417035 684 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 ATP5JP1-201ENST00000431631 322 ntBASIC4.81□□□□□ -1.64
SCN11AQ9UI33 SNORA71B-202ENST00000439232 272 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms