Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC004448.2-201ENST00000422360 586 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 SDCBPP2-201ENST00000424643 885 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC096632.1-201ENST00000427395 310 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRFN1Q9P244 OR4F13P-201ENST00000428478 931 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC138761.5-201ENST00000433967 325 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC099670.2-201ENST00000435130 321 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC079168.1-201ENST00000458741 345 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC104090.1-201ENST00000506341 1171 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 NDUFB4P12-201ENST00000513465 390 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 SNORA3.4-201ENST00000515969 96 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 RNU6-513P-201ENST00000516104 104 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 SCARNA20.4-201ENST00000516969 131 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC012400.1-201ENST00000518452 381 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 UBTFL10-201ENST00000528532 562 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC092490.3-201ENST00000545370 572 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 DUXAP6-201ENST00000553858 601 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 HIGD1AP17-201ENST00000554576 276 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AL359219.2-201ENST00000555184 348 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC009237.13-201ENST00000603193 276 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AC244107.2-201ENST00000611773 76 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AL049539.1-201ENST00000611964 459 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AP000484.1-201ENST00000620067 1252 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 AP003400.3-201ENST00000624904 346 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 LINC01739-205ENST00000641890 573 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRFN1Q9P244 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRFN1Q9P244 SMG1P4-204ENST00000523028 4131 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 CDR1-202ENST00000625883 1485 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRFN1Q9P244 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRFN1Q9P244 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 MUC2-202ENST00000613187 4845 ntBASIC4.85□□□□□ -1.63
LRFN1Q9P244 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
LRFN1Q9P244 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 Z95327.2-201ENST00000414579 1873 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC023421.1-201ENST00000590535 1785 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 ELL2P4-201ENST00000446870 1376 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AL122126.1-201ENST00000546905 1318 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 RNU6-216P-201ENST00000363282 104 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 TAF9BP1-201ENST00000396646 746 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC068533.2-201ENST00000411872 306 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 MTND4P22-201ENST00000413116 1169 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 MTND2P40-201ENST00000436718 841 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 Z80107.2-201ENST00000445127 392 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 RPL7P41-201ENST00000485823 957 ntBASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRFN1Q9P244 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.84□□□□□ -1.63
LRFN1Q9P244 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms